Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq19301 105 9e-18
seq16217 105 9e-18
seq20828 104 3e-17
seq20691 98.7 1e-15
seq11300 96.9 5e-15
seq14550 91.5 2e-13
seq3435 87.8 2e-12
seq17755 84.2 3e-11
>seq19301
Length=1192634
Score = 105 bits (116), Expect = 9e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
||| ||| |||||||||||||||||||| |||| |||| ||||| | |||||||||||||
Sbjct 590116 TAAGCCACTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 590057
Query 11781 TTCGATTCCCCGACGAGGAG 11800
||||||||||||||| ||||
Sbjct 590056 TTCGATTCCCCGACGGGGAG 590037
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 590108 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 590049
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 590048 CCCGACGGGGAG 590037
Score = 96.9 bits (106), Expect = 5e-15
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 139349 ACAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACC 139408
||| |||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||
Sbjct 590033 ACATCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACC 590092
Query 139409 ACTATACTAACGAGGA 139424
||||||||||||||||
Sbjct 590093 ACTATACTAACGAGGA 590108
>seq16217
Length=694317
Score = 105 bits (116), Expect = 9e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 11722 TAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGG 11780
||| ||| |||||||||||||||||||| |||| |||| ||||| | |||||||||||||
Sbjct 146668 TAAGCCACTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 146609
Query 11781 TTCGATTCCCCGACGAGGAG 11800
||||||||||||||| ||||
Sbjct 146608 TTCGATTCCCCGACGGGGAG 146589
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 146660 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 146601
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 146600 CCCGACGGGGAG 146589
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||
Sbjct 146586 CATCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 146645
Query 139410 CTATACTAACGAGGA 139424
|||||||||||||||
Sbjct 146646 CTATACTAACGAGGA 146660
>seq20828
Length=894333
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 28989 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 28930
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 28929 CCCGACGGGGAG 28918
Score = 100 bits (110), Expect = 4e-16
Identities = 68/75 (91%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 28992 CACTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 28933
Query 11786 TTCCCCGACGAGGAG 11800
|||||||||| ||||
Sbjct 28932 TTCCCCGACGGGGAG 28918
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 28918 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 28977
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 28978 TACTAACGAGGA 28989
>seq20691
Length=595870
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 553979 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 554038
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 554039 CCCGACGGGGAG 554050
Score = 96.9 bits (106), Expect = 5e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 11724 ACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTT 11782
|| || |||||||||||||||||||| |||| |||| ||||| | |||||||||||||||
Sbjct 553973 ACTCACTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 554032
Query 11783 CGATTCCCCGACGAGGAG 11800
| ||||||||||| ||||
Sbjct 554033 CAATTCCCCGACGGGGAG 554050
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 554050 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 553991
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 553990 TACTAACGAGGA 553979
>seq11300
Length=377726
Score = 96.9 bits (106), Expect = 5e-15
Identities = 70/80 (88%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| ||||| |||||||||||||| |||| |||| ||||| | |||||||||||||||| |
Sbjct 165213 CACTCCTCATTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAA 165154
Query 11786 TTCCCCGACGAGGAGGGAGG 11805
|||||||||| ||||| |||
Sbjct 165153 TTCCCCGACGGGGAGGAAGG 165134
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||| ||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||||
Sbjct 165210 TCCTCATTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 165151
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 165150 CCCGACGGGGAG 165139
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| | |||||||||||||||| | |||| |||||||| | |||||||
Sbjct 165139 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 165198
Query 139413 TACTAACGAGGA 139424
|||||| |||||
Sbjct 165199 TACTAATGAGGA 165210
>seq14550
Length=541
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||||||||||||||| ||||| ||| ||||| | ||| ||||||||||||||||
Sbjct 151 TTCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATT 210
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 211 CCCCGACGGGGAG 223
Score = 86.0 bits (94), Expect = 8e-12
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||| ||||| ||| ||||| | ||| |||||||||||||||||
Sbjct 152 TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTC 211
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 212 CCCGACGGGGAG 223
>seq3435
Length=1289550
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||||||||||||||| ||||| | || ||||| | ||| | ||||||||||||||
Sbjct 157 TTCCTCGTTAGTATAGTGGACAGTATCCTCGCCTGTCACGCGGAAAACCGGGGTTCGATT 216
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 217 CCCCGACGGGGAG 229
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||||||||||||||| ||||| | || ||||| | ||| | |||||||||||||||
Sbjct 158 TCCTCGTTAGTATAGTGGACAGTATCCTCGCCTGTCACGCGGAAAACCGGGGTTCGATTC 217
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 218 CCCGACGGGGAG 229
>seq17755
Length=1282
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 8656 ATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 8715
|||||||||||||||||||| ||| | ||| ||||| | || |||||||||||||||
Sbjct 233 ATTCCTCGTTAGTATAGTGGACAGTCTCTCCGCCTGTCACGTGGAAGACCGGGGTTCGAT 174
Query 8716 TCCCCGACGAGGAG 8729
||||||||| ||||
Sbjct 173 TCCCCGACGGGGAG 160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652145586898080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |