Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 159 3e-34
seq46 154 1e-32
seq1581 141 9e-29
seq20611 116 4e-21
seq19301 104 2e-17
>seq13143
Length=1991197
Score = 159 bits (176), Expect = 3e-34
Identities = 160/205 (78%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || |||| | | | || || ||||
Sbjct 1626591 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCTTCAAGCT 1626533
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || ||||||||||| ||||| |||||||||||||| |||||
Sbjct 1626532 GCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 1626473
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |
Sbjct 1626472 TGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1626413
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || || ||||||||
Sbjct 1626412 TCAGGGTTTTCACAAAGATCTGCAT 1626388
Score = 150 bits (166), Expect = 2e-31
Identities = 160/206 (78%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || |||||||| || |||| | | | || || | ||
Sbjct 1624797 ATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCA-TCTTCCAACT 1624739
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || || ||||||||||| |||||||||||||||||||| ||| |
Sbjct 1624738 GCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGAT-T 1624680
Query 133576 TTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || |||| | ||||| |||||| ||||||| || |||| ||||| ||| |||||
Sbjct 1624679 TTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCA 1624620
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||| ||||||||
Sbjct 1624619 GTCAGCGTCTTGACGAAGATCTGCAT 1624594
Score = 105 bits (116), Expect = 6e-18
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TTGAGCTG 133588
|| || ||||||||||| ||||| |||||||||||||| ||| ||| || |||| |
Sbjct 1625743 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGTT 1625685
Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648
||||| ||||| ||||||| || || | ||||| ||| ||||| ||||| || || ||
Sbjct 1625684 CTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGTGTCTTGAC 1625625
Query 133649 GAAAATCTGCAT 133660
||| ||||||||
Sbjct 1625624 GAAGATCTGCAT 1625613
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/127 (77%), Gaps = 3/127 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || |||||||| || |||| | | | || || | ||
Sbjct 1625588 ATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCA-TCTTCCAACT 1625530
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || || ||||||||||| |||||||||||||||||||| ||| |
Sbjct 1625529 GCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGAT-T 1625471
Query 133576 TTTGCTT 133582
|| ||||
Sbjct 1625470 TTAGCTT 1625464
Score = 82.4 bits (90), Expect = 7e-11
Identities = 97/129 (75%), Gaps = 2/129 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| ||| || ||| | | | || || | ||
Sbjct 1626363 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA-TCTTCCAACT 1626305
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| ||| | || | ||||||||||| ||||| ||||||||||| || |||||
Sbjct 1626304 GTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGGATCT 1626245
Query 133576 TTTGCTTGA 133584
| |||||
Sbjct 1626244 TGGCCTTGA 1626236
>seq46
Length=2207375
Score = 154 bits (170), Expect = 1e-32
Identities = 157/202 (78%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | || || |||||||||||
Sbjct 2030978 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 2030920
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| ||||| ||||||||||| || |||||| |||
Sbjct 2030919 AGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTT 2030860
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| ||||| ||
Sbjct 2030859 GACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGT 2030800
Query 133643 TTTTACGAAAATCTGCATGGCT 133664
|| ||||| ||||||||| ||
Sbjct 2030799 CTTGACGAAGATCTGCATGCCT 2030778
Score = 145 bits (160), Expect = 7e-30
Identities = 159/206 (77%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || ||| | | | || || ||||
Sbjct 2031874 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCT 2031816
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || ||||||||||| ||||| |||||||||||||| ||| |
Sbjct 2031815 GCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-T 2031757
Query 133576 TTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || |||| | ||||| |||||| ||||||| || |||| ||||| ||| |||||
Sbjct 2031756 TTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCA 2031697
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 2031696 GTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 141 bits (156), Expect = 9e-29
Identities = 154/199 (77%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | || || |||||||||||
Sbjct 2030750 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 2030692
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
||| | || || ||||||||||| ||||| |||||||||||||| ||| ||| || |
Sbjct 2030691 AGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTT 2030633
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| ||||||| || |||| ||||| ||| ||||| ||||| |
Sbjct 2030632 TCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCG 2030573
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 2030572 TCTTCACAAAGATCTGCAT 2030554
Score = 141 bits (156), Expect = 9e-29
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| ||| || ||| | | | || || | ||
Sbjct 2031213 ATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA-TCTTCCAACT 2031155
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| ||| | || | ||||||||||| ||||| ||||||||||| || |||||
Sbjct 2031154 GTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCT 2031095
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |
Sbjct 2031094 TGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 2031035
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || ||||| ||||||||
Sbjct 2031034 TCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 138 bits (152), Expect = 1e-27
Identities = 151/198 (76%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || || ||| | | | ||||| |||||||||||
Sbjct 2031639 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCCTCCAGCTGCTTGCC 2031581
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || |||||||| || ||||| |||||||||||||| |||||| |||
Sbjct 2031580 AGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 2031521
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || || | |||| ||| ||||| ||||| ||
Sbjct 2031520 GACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTCTTGCCAGTCAGCGT 2031461
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 2031460 CTTGACGAAGATCTGCAT 2031443
Score = 122 bits (134), Expect = 8e-23
Identities = 134/176 (76%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | || || |||||||| ||
Sbjct 2031411 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTACC 2031353
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || ||||||||||| ||||| |||||||||||||| |||||| |||
Sbjct 2031352 AGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 2031293
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | ||| | |||||| ||||||| || |||| ||||| |||||| || ||||
Sbjct 2031292 GACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCA 2031237
>seq1581
Length=2594311
Score = 141 bits (156), Expect = 9e-29
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| || || ||| ||| | || || ||||
Sbjct 1373194 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCA-TCTTCCAGCT 1373252
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| ||| | || |||| ||||||||| || || |||||||| ||||| |||||
Sbjct 1373253 GTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCT 1373312
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||||| | ||||| |||||| | ||||| || || | ||||| ||| ||||| |
Sbjct 1373313 TTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTCTTGCCAG 1373372
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| || || ||||||||
Sbjct 1373373 TGAGGGTTTTGACAAAGATCTGCAT 1373397
>seq20611
Length=922441
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| || || ||| | | | || || ||||| |||||
Sbjct 520575 GTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCA-TCTTCCAGCTGTTTGCC 520633
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || || |||||||| ||||| |||||| |||
Sbjct 520634 GGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTAGCCTT 520693
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| | ||||| || || | ||||| ||| || || || || ||
Sbjct 520694 GACGTTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTACCAGTGAGGGT 520753
Query 133643 TTTTACGAAAATCTGCAT 133660
||| || || ||||||||
Sbjct 520754 TTTGACAAAGATCTGCAT 520771
Score = 113 bits (124), Expect = 4e-20
Identities = 152/209 (73%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||||||||| || || ||||| || || ||| ||| | || || ||||
Sbjct 520340 ATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCA-TCTTCCAGCT 520398
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | || | || ||||||||| || || || ||||| || || |||||
Sbjct 520399 GTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGGATCT 520458
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| ||||| | ||||| || || | ||||| ||| ||||| |
Sbjct 520459 TAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAACCTCAAGGGTGATGGTCTTGCCTG 520518
Query 133636 TCAGAGTTTTTACGAAAATCTGCATGGCT 133664
||| || || ||||| ||||||||| ||
Sbjct 520519 TCAAGGTCTTGACGAAGATCTGCATGCCT 520547
>seq19301
Length=1192634
Score = 104 bits (114), Expect = 2e-17
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
|||||||||| ||||| | ||||| || ||||||||||| ||||| ||||| || |
Sbjct 383150 TGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCCCAGGTTCTGCTGGT 383209
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||||||| |||||| || |||||||| |||||||| ||| ||| || ||
Sbjct 383210 TGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCGGTCTC 383261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482903044237680
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