Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq85242 131 2e-25
seq22175 84.2 3e-11
>seq85242
Length=2466
Score = 131 bits (144), Expect = 2e-25
Identities = 283/420 (67%), Gaps = 14/420 (3%)
Strand=Plus/Minus
Query 176878 AACGTGTTTTC--CAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTT 176935
|| |||||| | |||| |||||| | || ||||| ||||||| || | | |
Sbjct 599 AAAGTGTTTACGCCAGTCAAAGTACTTCAGGTAAAGCTCCTCGTTTTTGTCAAGGAAGAG 540
Query 176936 GAGGTGCGAGGCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCC 176995
||| | ||||| || | || |||| |||| | ||||| |||||||| | |||
Sbjct 539 GAGATAATCAGCCAGCTCCTTCGGAGACGGCAAGTCATCAACGTGGATGAAAGCATTTCC 480
Query 176996 CGGGACGTAATTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGC 177055
| | ||| | || | || ||||| || | || |||||| || | |||||| | |||
Sbjct 479 CTGCACGAAGTTCTGATAGTTCTCCCTTGGTGGTCCGAGCACAACGGGTACGG----TGC 424
Query 177056 CATAAGAGATCGG----TAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAA 177111
|| || | ||| || | ||| || || |||||||| |||| | |||||||| |
Sbjct 423 CAACGGAAAGCGGGTTGTACAATTTCTCAGTGATATAGTCTTTGTGAATCGAGTTCTCGA 364
Query 177112 ACGCGAGATAGAATTTACAGGAAG--ATAGTAGCGGGATGAAGTCATCATCGGGTATATA 177169
| || | ||||||||||||| | || |||| | || |||| | || | || ||
Sbjct 363 ATGCCAAATAGAATTTACAGCTTGCGATTGTAGGGAAAT--AGTCCTGGTCAGAAATGTA 306
Query 177170 ATCTCCTACTACGTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTA 177229
|| || | | | | |||||| |||| | || ||||| || ||| || ||||||
Sbjct 305 CTCACCAAATGCTTGTCCGTATGCATGAACCTCGATGTGCTTGTAGAGTTCATTGTAGTA 246
Query 177230 TCTCGATCTCACGTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289
| || ||| ||||| || ||||||||||||||||| ||| |||| | |||| ||||
Sbjct 245 TTTCACTCTGACGTGATCTGGGTTCCAATTGCTGACGATCCAACAAATCAGCTTGTTCTT 186
>seq22175
Length=1864744
Score = 84.2 bits (92), Expect = 3e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
||||| || | || |||| | |||| | ||||| |||||||| | |||| | | | |
Sbjct 234174 GCCAGCTCCTTTGGAGACGGGAAGTCATCGACGTGGATGAAAGCATTTCCCTGCATGAAG 234233
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065
|| | || ||||| || | || |||||| || | |||||| | || | ||| |
Sbjct 234234 TTCTGATAGTTCTCCCTTGGTGGTCCGAGCACCACGGGTACAGTGCCGACGGAAAGCGGG 234293
Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125
||| | ||| || || |||||||| |||| | ||||||||||| || | ||| |||
Sbjct 234294 TTGTACAATTTCTCAGTGATATAGTCTTTGTGAATTGAGTTCTCAAATGCCAAATAAAAT 234353
Query 177126 TTACAG 177131
||||||
Sbjct 234354 TTACAG 234359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577812484867200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |