Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq20611 118 7e-22
seq13143 113 3e-20
seq46 113 3e-20
seq1581 109 4e-19
>seq20611
Length=922441
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || || | ||| ||||||| ||| | ||| ||||||||| |||||||| || ||
Sbjct 520316 ACCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGA 520375
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| |||||| | || |||| ||||| |||||||| ||||| | |||||| || | ||
Sbjct 520376 CAATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520435
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700
| ||||||||| || || || || | | | ||| |||||| |||| || |
Sbjct 520436 AATACCTTCTTTATCCTGGATCTTAGCCTTGA-CGTTCTCAATGGTGTCACTTGGCTCAA 520494
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| || || ||||| || || || || |||||||||||
Sbjct 520495 CCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || || | ||| | ||| | ||| | |||| |||||| || |||||||| || ||
Sbjct 520545 CCTCCCCTGAGACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 520604
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| |||||| | || |||| ||||| |||||||| ||||| | |||||| || | ||
Sbjct 520605 AATGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 520664
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| || || | | || | || | |||||||||| || ||
Sbjct 520665 ATGCCTTCTTTGTCCTGGATCTT-AGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAAC 520723
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || ||||| || | ||||| ||||||||||||||
Sbjct 520724 CTCAAGGGTGATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771
>seq13143
Length=1991197
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | || | ||| || ||| || || || ||||||||||| ||
Sbjct 1624821 ACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGA 1624762
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || ||||| || || || ||||| |||| ||||||||| || | ||
Sbjct 1624761 CAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1624702
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| ||||| | || || | || | ||||||||| | || |
Sbjct 1624701 GATGCCTTCCTTGTCTTGGATTTT-AGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAA 1624643
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | ||| || || |||||||||||
Sbjct 1624642 CCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 1624594
Score = 104 bits (114), Expect = 2e-17
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | || | ||| || ||| |||||| || |||||||| |||||
Sbjct 1626387 ACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 1626328
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || ||||| ||||| ||||| || |||||||||||||| || | ||
Sbjct 1626327 CAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGG 1626268
Query 33642 CACACCTTCTTTGTC 33656
| ||||| || ||
Sbjct 1626267 AATGCCTTCCTTATC 1626253
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | || | ||| || ||| || || || ||||||||||| ||
Sbjct 1625612 ACCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGA 1625553
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || ||||| || || || ||||| |||| ||||||||| || | ||
Sbjct 1625552 CAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1625493
Query 33642 CACACCTTCTTTGTC 33656
| ||||| |||||
Sbjct 1625492 GATGCCTTCCTTGTC 1625478
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| || ||| ||| || || |||||||| ||||| || |||||| | || || | ||
Sbjct 1626591 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCAAGCTG 1626532
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| || || || |||| ||||||||| || | || | ||||| ||||| || ||
Sbjct 1626531 CTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 1626472
Query 33666 CTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
|||| | | ||| ||||||||| | || || || | ||||| || || || |
Sbjct 1626471 GGCCTTCA-CGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 1626413
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| | ||||| |||||||||||||||
Sbjct 1626412 TCAGGGTTTTCACAAAGATCTGCATA 1626387
>seq46
Length=2207375
Score = 113 bits (124), Expect = 3e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||| || |||||| ||| || || |||||||| ||||| || |||||| | || ||
Sbjct 2030763 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTC 2030704
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| || || || || || |||| ||||||||| || | || | ||||| |||||
Sbjct 2030703 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTG 2030644
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
||||| ||||| ||| ||| ||||||||| | || || || | ||||| || |
Sbjct 2030643 GATTTTAGCTTTCA-CATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCT 2030585
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | ||| || ||||||||||||||
Sbjct 2030584 TGCCAGTCAGCGTCTTCACAAAGATCTGCAT 2030554
Score = 109 bits (120), Expect = 4e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | ||||| || |||||| ||| || || |||||||| |||||
Sbjct 2031442 ACCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 2031383
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || |||| || || || ||||| |||| ||||||||| || | ||
Sbjct 2031382 CAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 2031323
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| || || | | || | || | ||||||||| | || |
Sbjct 2031322 AATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAA 2031264
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAA 33739
| || | ||||| |||||||| || || || || ||||
Sbjct 2031263 CCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCACAA 2031225
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | ||||| || |||||| ||| || || |||||||| || ||
Sbjct 2031670 ACCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 2031611
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || |||| || || || || || |||| |||||||||||| | ||
Sbjct 2031610 CAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGG 2031551
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| || || | | || | || | |||||| || | || |
Sbjct 2031550 AATGCCTTCCTTGTCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAA 2031492
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | ||| || || ||||||||||||
Sbjct 2031491 CTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATA 2031442
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| | ||||| || |||||| ||| || || |||||||| |||||
Sbjct 2031009 ACCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 2030950
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| | || |||| || || || || || |||| ||||||||| || | ||
Sbjct 2030949 CAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 2030890
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| || || || || | | || | || | ||||||||| | || |
Sbjct 2030889 AATGCCTTCCTTATCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAA 2030831
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | ||| || || |||||||||||
Sbjct 2030830 CCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 33533 AACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTT 33592
|||| | || | ||| || ||| |||||| || |||||||| ||||| || ||||||
Sbjct 2031226 AACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTC 2031167
Query 33593 CGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTT 33652
| || ||||| ||||| ||||| || |||||||||||||| || | || | ||||| |
Sbjct 2031166 CATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCT 2031107
Query 33653 TGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTG 33711
| || || || | | || | || | ||||||||| | || || || | |||
Sbjct 2031106 TATCCTGGATCTT-GGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTG 2031048
Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || || || || || || || || ||||||||||||
Sbjct 2031047 ATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATA 2031009
Score = 98.7 bits (108), Expect = 7e-16
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605
||| || ||| ||| || || |||||||| ||||| || |||||| | || |||| ||
Sbjct 2031874 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTG 2031815
Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665
|| || || || |||| ||||||||| || | || | ||||| ||||| |||||
Sbjct 2031814 CTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTT 2031755
Query 33666 CTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724
||| | ||| ||| ||||||||| | || || || | ||||| || || || |
Sbjct 2031754 AGCTTTGA-CATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAG 2031696
Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || ||||||||||||
Sbjct 2031695 TCAAGGTCTTCACGAAGATCTGCATA 2031670
>seq1581
Length=2594311
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| || || | ||| | ||||| ||| | ||| |||||| || |||||||| || ||
Sbjct 1373170 ACCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGA 1373229
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|||||||| | || |||| ||||| || || || |||| | |||||| || | ||
Sbjct 1373230 CAGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGG 1373289
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| || || || | || | || | ||||||||||| || |
Sbjct 1373290 AATGCCTTCTTTGTCCTGGATCTT-TGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGA 1373348
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| || || || || | ||||| ||||||||||||||
Sbjct 1373349 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328360751053440
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