Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq46 100 3e-16
seq13143 91.5 1e-13
seq20611 86.0 6e-12
seq1581 82.4 7e-11
>seq46
Length=2207375
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || | ||| | | | ||||| || || |||||||||||| || ||| || |
Sbjct 2031885 CGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA 2031826
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| ||||| | |||| |||||||| || || ||||| |||||||| ||
Sbjct 2031825 TCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTG 2031766
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||| | | || | || ||| | ||||| || |||| || |
Sbjct 2031765 TCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 2031706
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||||| || || | ||| ||||||||
Sbjct 2031705 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| || ||| || |||||| ||||| || || |
Sbjct 2030747 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCG 2030688
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| |||||||| || || ||||| |||||
Sbjct 2030687 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCTTTCACA 2030628
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | ||||| || |||| || | || || |||||||| || ||
Sbjct 2030627 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTC 2030568
Query 132110 ATGAAAATCTGCAT 132123
| || ||||||||
Sbjct 2030567 ACAAAGATCTGCAT 2030554
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| || ||| || |||||| ||||| || || |
Sbjct 2030975 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCG 2030916
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| |||||||| ||||| || || || |
Sbjct 2030915 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACG 2030856
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || ||| | ||||| || |||| || | || || |||||||| || ||
Sbjct 2030855 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTG 2030796
Query 132110 ATGAAAATCTGCATGACT 132127
| ||| ||||||||| ||
Sbjct 2030795 ACGAAGATCTGCATGCCT 2030778
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || | ||| | | | |||||||| || |||||||||||| || || || |
Sbjct 2031224 CGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA 2031165
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | |||||| |||| |||| | |||||| || || ||||| |||||||| |||
Sbjct 2031164 TCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTA 2031105
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || || | | || | || ||| | ||||| || |||| || |
Sbjct 2031104 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 2031045
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||||| || || | ||| ||||||||
Sbjct 2031044 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 89.7 bits (98), Expect = 5e-13
Identities = 123/172 (72%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || |||||||||||| || ||| || |||||| ||||| ||||| | |
Sbjct 2031408 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCA 2031349
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| |||||||| || || || || || |
Sbjct 2031348 AAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 2031289
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCA 132101
| || | || ||| | ||||| || |||| || | |||||||||||||
Sbjct 2031288 TTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCA 2031237
>seq13143
Length=1991197
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| || | ||| | | | ||||| || || |||||||||||| || || || |
Sbjct 1626602 CGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA 1626543
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | |||| |||||||| || || ||||| |||||||| ||
Sbjct 1626542 TCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTG 1626483
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | || | || ||| | ||||| || |||| || |
Sbjct 1626482 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1626423
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || |||||||| ||||| | || ||||||||
Sbjct 1626422 GTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
>seq20611
Length=922441
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| |||| ||| | | | ||||||||||| ||||||||||| || || || |
Sbjct 520329 CGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCA 520388
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | |||| | | ||| || || || || || |||||||||
Sbjct 520389 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTA 520448
Query 132029 TC 132030
||
Sbjct 520449 TC 520450
>seq1581
Length=2594311
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| ||| | | | |||||||| || ||||||||||| || || || |
Sbjct 1373183 CGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCA 1373242
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| || | |||| || | ||| || || || || |||||||||||
Sbjct 1373243 TCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTG 1373302
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || ||| || | | || | || ||| | ||||| || || | || |
Sbjct 1373303 TCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATG 1373362
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| || ||||| | || ||||||||
Sbjct 1373363 GTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476100737489520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |