Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq19353 100 9e-18 seq19291 98.7 3e-17 seq16211 98.7 3e-17 seq13103 98.7 3e-17 seq1571 98.7 3e-17 seq19256 96.9 1e-16 seq17715 96.9 1e-16 seq16388 95.1 4e-16 seq3363 91.5 5e-15 seq7433 89.7 2e-14 seq9602 86.0 2e-13 seq1607 82.4 2e-12 seq16461 80.6 8e-12 >seq19353 Length=1941980 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 390626 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 390567 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 390566 CCCGGGTTTCGGC 390554 >seq19291 Length=3177524 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1165380 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1165439 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1165440 CCGGGTTTCGGC 1165451 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1166323 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1166382 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1166383 CCGGGTTTCGGC 1166394 >seq16211 Length=1380086 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 761102 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 761043 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 761042 CCGGGTTTCGGC 761031 >seq13103 Length=1669337 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 183402 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 183343 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 183342 CCGGGTTTCGGC 183331 >seq1571 Length=3614795 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||| Sbjct 353746 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCG 353687 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 353686 GGTTTCGGC 353678 >seq19256 Length=2582276 Score = 96.9 bits (106), Expect = 1e-16 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1243165 ATGGCCCAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 1243106 Query 2826 ACCCCGGGCTT 2836 | |||||| || Sbjct 1243105 ATCCCGGGTTT 1243095 >seq17715 Length=438707 Score = 96.9 bits (106), Expect = 1e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 437226 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 437167 Query 2828 CCCGGGCTTCAGC 2840 | ||| ||| || Sbjct 437166 CTAGGGTTTCGGC 437154 Score = 86.0 bits (94), Expect = 2e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 392057 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 392006 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2779 CTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTT 2836 |||||||||||| || ||||||||||||||||||||||||||||| | |||||| || Sbjct 386786 CTCAGTTGGGAGGGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCCGGGTTT 386729 Score = 78.8 bits (86), Expect = 3e-11 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||| ||| |||||||||||||||||| ||||||| ||||||||||||||| ||||| Sbjct 404584 GGCAGAAATAGCTCAGTTGGGAGAGCGTTAGACTCAAGATCTAAAGGTCCGTGGTT 404529 >seq16388 Length=2443494 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||| |||||||||| | | Sbjct 1642671 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGATCCCTGGTTCGATC 1642612 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1642611 CCGGGTTTCGGC 1642600 >seq3363 Length=360990 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||| || | Sbjct 3752 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTTCCTGGATCGAT 3693 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 3692 CCCGGGTTTCGGC 3680 Score = 89.7 bits (98), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | | ||||||||||||||| || |||||||||||||||||||||||||||||| | Sbjct 4982 GGCCGCAATAGCTCAGTTGGGAGGGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 4923 Query 2828 CCCGGGCTT 2836 |||||| || Sbjct 4922 CCCGGGTTT 4914 Score = 87.8 bits (96), Expect = 6e-14 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || ||| ||| |||||||||||||||||| ||||||| |||||||||||||||| ||||| Sbjct 24893 TAAGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTCAAGATCTAAAGGTCCCAGGTTC 24834 Query 2825 AACCCC 2830 || ||| Sbjct 24833 AATCCC 24828 Score = 86.0 bits (94), Expect = 2e-13 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| |||||||||| |||||||||||||||| || | |||| Sbjct 5450 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAATATCTAAAGGTCCCTGGATCGATCCCG 5391 Query 2832 GGCTT 2836 || || Sbjct 5390 GGTTT 5386 Score = 78.8 bits (86), Expect = 3e-11 Identities = 61/73 (84%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| || |||||||||||||| ||||||||||||||| ||| |||||||| | | Sbjct 10619 GGCCGAAATATCTCAGTTGGGAGAGTGTTAGACTGAAGATCTGAAGTTCCCTGGTGCGAT 10560 Query 2828 CCCGGGCTTCAGC 2840 || ||| |||||| Sbjct 10559 CCTGGGTTTCAGC 10547 >seq7433 Length=486 Score = 89.7 bits (98), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||| ||||||| |||||||||||||||||||||| ||||||| | |||| Sbjct 435 GAAATAGCTCAGTTAGGAGAGCGTTAGACTGAAGATCTAAAGGTCACTGGTTCGATCCCG 376 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 375 GGTTTCGGC 367 >seq9602 Length=2116597 Score = 86.0 bits (94), Expect = 2e-13 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||| Sbjct 1116569 TTGTGGCTGAAATAGCTCAGTTGTGAGAGCGTTAGACTGAAGATCTTAAGGTCCCTGGTT 1116628 Score = 82.4 bits (90), Expect = 2e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||||||| ||||||||||| |||||| ||||||||||||| |||||||| |||||| Sbjct 1112510 TTGTGGCTGAAATAGCTCAGTTGCGAGAGCGTTAGACTGAAGATTTAAAGGTCACTGGTT 1112569 Score = 82.4 bits (90), Expect = 2e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || |||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||| Sbjct 1137033 TTGTGGCTGAATTAGCTCAGTTGCCAGAGCATTAGACTGAAGAGCTAAAGGTCTCTGGTT 1137092 >seq1607 Length=42353 Score = 82.4 bits (90), Expect = 2e-12 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 || || | ||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 24844 TTGTGACAGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGAACTAAAGGTCCCGGGTT 24785 >seq16461 Length=479 Score = 80.6 bits (88), Expect = 8e-12 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 2779 CTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCTTCA 2838 ||||||||||||||| ||||||||||||||||||||||||||||| | || ||| ||| Sbjct 479 CTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTAGAGCCTGGGTTTCG 420 Query 2839 GC 2840 || Sbjct 419 GC 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15834746596890