Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq46 131 2e-25 seq13143 122 8e-23 seq83 87.8 2e-12 >seq46 Length=2207375 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || |||||||||||||| ||||| Sbjct 2031406 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAA 2031347 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || ||||||||| |||||| ||| | | Sbjct 2031346 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2031287 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| |||||||| ||||| || ||||| Sbjct 2031286 CTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227 Query 35725 AA 35726 || Sbjct 2031226 AA 2031225 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || || || Sbjct 2030745 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 2030686 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 |||| ||||||||||| | ||||| || |||||||| ||| ||| || |||| | Sbjct 2030685 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTCACAT 2030627 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||||| | || ||||| | ||||| || || || |||| || |||| Sbjct 2030626 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCA 2030567 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 2030566 CAAAGATCTGCAT 2030554 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || |||||||||||||| || || Sbjct 2031862 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAA 2031803 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 |||| ||||||||||| | ||||| || |||||||| ||| ||| || || | | Sbjct 2031802 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACAT 2031744 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | |||||||| | || ||||| | ||||| || || || ||||| || |||| Sbjct 2031743 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCA 2031684 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2031683 CGAAGATCTGCAT 2031671 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || || || Sbjct 2030973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 2030914 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || ||||| ||| |||||| ||| | | Sbjct 2030913 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 2030854 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || |||| || || || Sbjct 2030853 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 2030794 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2030793 GAAGATCTGCAT 2030782 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| || || || | || |||| ||| || || || || Sbjct 2031201 CTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAA 2031142 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||||| || ||||| ||| |||||| ||| | | Sbjct 2031141 GATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 2031082 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 2031081 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 2031022 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2031021 GAAGATCTGCAT 2031010 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || ||||||||||| || || || Sbjct 2031634 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 2031575 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | ||||| || ||||||||| |||||| ||| | | Sbjct 2031574 GATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2031515 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || || |||| ||||| || || || |||| || || || Sbjct 2031514 CTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGAC 2031455 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 2031454 GAAGATCTGCAT 2031443 >seq13143 Length=1991197 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || || || | || || |||||||| || || || Sbjct 1626579 CTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAA 1626520 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || ||||||||| |||||| ||||| | Sbjct 1626519 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1626460 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || |||| |||||||| Sbjct 1626459 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 1626400 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1626399 AAAGATCTGCAT 1626388 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| | || || || | || |||| |||||| || ||||| Sbjct 1624784 TCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAG 1624725 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | ||| | || |||||||| ||| ||| |||| ||| Sbjct 1624724 ATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGTT 1624666 Query 35666 -GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || |||| || || || Sbjct 1624665 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 1624606 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1624605 GAAGATCTGCAT 1624594 >seq83 Length=2661154 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 35635 CTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCAC 35694 |||||||||| |||||| ||||| | | | | |||||||| | || ||||| | Sbjct 1639120 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAG 1639179 Query 35695 CGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 ||||| |||||||| ||||||||||||||||| ||||||||| || Sbjct 1639180 GGTGATGGTTTTACCGGTCAAAGTTTTCACAAAGATCTGCATTTTG 1639225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450310788784560