Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq46 131 2e-25
seq13143 122 8e-23
seq83 87.8 2e-12
>seq46
Length=2207375
Score = 131 bits (144), Expect = 2e-25
Identities = 138/182 (76%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || |||||||||||||| |||||
Sbjct 2031406 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAA 2031347
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||||||| |||||| ||| | |
Sbjct 2031346 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2031287
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| |||||||| ||||| || |||||
Sbjct 2031286 CTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227
Query 35725 AA 35726
||
Sbjct 2031226 AA 2031225
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || || ||
Sbjct 2030745 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 2030686
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
|||| ||||||||||| | ||||| || |||||||| ||| ||| || |||| |
Sbjct 2030685 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTCACAT 2030627
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | |||||||| | || ||||| | ||||| || || || |||| || ||||
Sbjct 2030626 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCA 2030567
Query 35724 CAAATATCTGCAT 35736
|||| ||||||||
Sbjct 2030566 CAAAGATCTGCAT 2030554
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || |||||||||||||| || ||
Sbjct 2031862 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAA 2031803
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
|||| ||||||||||| | ||||| || |||||||| ||| ||| || || | |
Sbjct 2031802 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACAT 2031744
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | |||||||| | || ||||| | ||||| || || || ||||| || ||||
Sbjct 2031743 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCA 2031684
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 2031683 CGAAGATCTGCAT 2031671
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || || ||
Sbjct 2030973 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 2030914
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||| ||| |||||| ||| | |
Sbjct 2030913 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 2030854
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| || || ||
Sbjct 2030853 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 2030794
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2030793 GAAGATCTGCAT 2030782
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| |||| || || || | || |||| ||| || || || ||
Sbjct 2031201 CTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAA 2031142
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | ||||| || ||||| ||| |||||| ||| | |
Sbjct 2031141 GATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTT 2031082
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 2031081 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 2031022
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2031021 GAAGATCTGCAT 2031010
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| || | || ||||||||||| || || ||
Sbjct 2031634 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 2031575
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | ||||| || ||||||||| |||||| ||| | |
Sbjct 2031574 GATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2031515
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || || |||| ||||| || || || |||| || || ||
Sbjct 2031514 CTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGAC 2031455
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 2031454 GAAGATCTGCAT 2031443
>seq13143
Length=1991197
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || || || | || || |||||||| || || ||
Sbjct 1626579 CTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAA 1626520
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||||||| |||||| ||||| |
Sbjct 1626519 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 1626460
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| ||||||||
Sbjct 1626459 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCAC 1626400
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1626399 AAAGATCTGCAT 1626388
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||||||||| | || || || | || |||| |||||| || |||||
Sbjct 1624784 TCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCAAAG 1624725
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | ||| | || |||||||| ||| ||| |||| |||
Sbjct 1624724 ATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGTT 1624666
Query 35666 -GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| || || ||
Sbjct 1624665 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGAC 1624606
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 1624605 GAAGATCTGCAT 1624594
>seq83
Length=2661154
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 35635 CTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCAC 35694
|||||||||| |||||| ||||| | | | | |||||||| | || ||||| |
Sbjct 1639120 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAG 1639179
Query 35695 CGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
||||| |||||||| ||||||||||||||||| ||||||||| ||
Sbjct 1639180 GGTGATGGTTTTACCGGTCAAAGTTTTCACAAAGATCTGCATTTTG 1639225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450310788784560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |