Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq46 122 9e-23 seq20611 116 4e-21 seq13143 116 4e-21 seq1581 105 7e-18 seq77944 91.5 1e-13 seq3398 91.5 1e-13 >seq46 Length=2207375 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| ||||| || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct 2030780 CCTCCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2030721 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| ||||||||| || || || Sbjct 2030720 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 2030661 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| ||||| ||| || || | |||||| | || || Sbjct 2030660 ATGCCTTCCTTGTCTTGGATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 2030601 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || ||||| || || || | || || || || || ||||| || Sbjct 2030600 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCATCTT 2030551 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||| || || ||||| ||||| || |||||||||||| | |||| | Sbjct 2031888 AGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGT 2031829 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || |||| ||||||||| || || || |||||||| Sbjct 2031828 CCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCC 2031769 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| ||||| |||||| || | |||||| | || || ||||| || Sbjct 2031768 TTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTG 2031709 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || ||||| || ||||| Sbjct 2031708 ATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct 2031008 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2030949 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| ||||||||| || || || Sbjct 2030948 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGA 2030889 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| || | |||||| | || || Sbjct 2030888 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACC 2030829 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || ||||| || ||||| Sbjct 2030828 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct 2031441 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2031382 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||| ||||||||| || || || Sbjct 2031381 AGGGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGA 2031322 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| || | |||||| | || || Sbjct 2031321 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACC 2031262 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 ||||| || ||||||||||| || || || || || Sbjct 2031261 TCGAGGGTGATGGTTTTACCAGTCAAGGTCTTCAC 2031227 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| ||||| || ||||| ||||| || ||||||||||| Sbjct 2031669 CCACCTCTCAGACGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 2031610 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || |||| |||||||||||| || || Sbjct 2031609 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGA 2031550 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| || | ||||| | || || Sbjct 2031549 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACT 2031490 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| ||||| || || || | || || ||||| || ||||| Sbjct 2031489 TCCAAAGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| || || || || ||||| || || || |||||||||||| | ||| | Sbjct 2031224 CGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA 2031165 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | ||||||||| || || |||||||||||||| || || || |||||||| || Sbjct 2031164 TCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTA 2031105 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || ||||| || | |||||| | || || ||||| || ||| Sbjct 2031104 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 2031045 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| || ||||| Sbjct 2031044 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010 >seq20611 Length=922441 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| ||||| |||||||| || || | ||||| || ||||| ||||||||||| | | Sbjct 520317 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGAC 520376 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| || || || ||||||||||| ||||| ||||| | |||||| || || || Sbjct 520377 AA-TGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520435 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| || || || || ||||| || | ||||| | || || Sbjct 520436 AATACCTTCTTTATCCTGGATCTTAGCCTTGACGTTCTCAATGGTGTCACTTGGCTCAAC 520495 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || || || || ||||| || ||||| Sbjct 520496 CTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 520543 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| ||||| |||| ||| || || | ||||| || || || ||||||||||| | | Sbjct 520545 CCTCCCCTGAGACGCAGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 520604 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || ||||||||||| ||||| ||||| | |||||| || || || Sbjct 520605 AATG-TGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 520663 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 ||||||||||| || || || || ||||| || | ||||||| | || || Sbjct 520664 AATGCCTTCTTTGTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAAC 520723 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || | ||||| || || || ||||| Sbjct 520724 CTCAAGGGTGATGGTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771 >seq13143 Length=1991197 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || |||| || || || || ||||||||||| || |||||||| || | | Sbjct 1624820 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1624761 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | ||| | || || | ||| ||||| ||||| |||| ||||||||| || || || Sbjct 1624760 AGC-GTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1624702 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| ||||| |||||| || | |||||| | || || Sbjct 1624701 GATGCCTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAAC 1624642 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || ||||| || || || | || || ||||| || ||||| || Sbjct 1624641 CTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTT 1624591 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || |||| || || || || ||||||||||| || |||||||| || | | Sbjct 1625611 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGAC 1625552 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | ||| | || || | ||| ||||| ||||| |||| ||||||||| || || || Sbjct 1625551 AGC-GTGCGTCCATCTTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGG 1625493 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 |||||||| || ||||| ||||| |||||| Sbjct 1625492 GATGCCTTCCTTGTCTTGGATTTTAGCTTTGAC 1625460 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||| || || ||||| ||||| || |||||||||||| | ||| | Sbjct 1626605 AGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGT 1626546 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| ||||||||| || || || |||||||| Sbjct 1626545 CCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCC 1626486 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| | || || ||||| || Sbjct 1626485 TTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTG 1626426 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | ||||| || || || ||||| Sbjct 1626425 ATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| || || || || ||||| || || || |||||||||||| Sbjct 1626386 CCACCTCTCAGACGCAGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1626327 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||||||||| || || |||||||||||||| || || || Sbjct 1626326 AGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGA 1626267 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 |||||||| || ||||| || || Sbjct 1626266 ATGCCTTCCTTATCTTGGATCTT 1626244 >seq1581 Length=2594311 Score = 105 bits (116), Expect = 7e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| ||||| |||| ||| || || | ||||| || || || |||||||||| | Sbjct 1373171 CCTCCCCTGAGACGCAGCACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGT--CAG 1373228 Query 134547 ACGGTGTGAGA--GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||||| || || || ||||||||||| || || |||| | |||||| || || | Sbjct 1373229 ACAGTGTGCGACCATCTTCCAGCTGTTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGG 1373288 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||||||||| || || || ||| ||||| || | |||||| | || | Sbjct 1373289 GAATGCCTTCTTTGTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGA 1373348 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || ||||| || || || | ||||| || || || ||||| Sbjct 1373349 CCTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 1373397 >seq77944 Length=846 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 ||||| || || | ||| | || ||||| | || |||||||| ||||| || || ||| Sbjct 2 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 61 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| ||||||||| || ||| ||||||||||| ||||| || ||||| | ||| Sbjct 62 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 121 Query 8353 ATTGTACAGTACA 8365 |||||| |||||| Sbjct 122 ATTGTAGAGTACA 134 >seq3398 Length=854497 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 ||||| || || | ||| | || ||||| | || |||||||| ||||| || || ||| Sbjct 23411 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 23470 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| ||||||||| || ||| ||||||||||| ||||| || ||||| | ||| Sbjct 23471 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 23530 Query 8353 ATTGTACAGTACA 8365 |||||| |||||| Sbjct 23531 ATTGTAGAGTACA 23543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504857105678640