Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq19376 98.7 8e-16
seq17618 93.3 3e-14
seq11199 91.5 1e-13
seq6006 89.7 4e-13
seq19302 87.8 1e-12
seq11759 82.4 6e-11
>seq19376
Length=955028
Score = 98.7 bits (108), Expect = 8e-16
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| ||||| || || ||| ||| |||||||||||||| | | ||||| |||
Sbjct 784360 TGATGGCGTTGCCCCCGTGCCATGCGTTGTGTCAGTTTTACGTGTCAGACGGTGAGTTGT 784301
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| ||||| |||| || | || ||||| || || || || || || || ||||| || |
Sbjct 784300 CGTGTCAGCTGTACCAGCGCTCTGGTGATATCGGTCTGGGTGTGCCTTTCAACATCGCCA 784241
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198
| || || ||||| || || |||||||| |||
Sbjct 784240 GCTACGCACTGCTGACCTACATGATTGCCCAC 784209
>seq17618
Length=1604196
Score = 93.3 bits (102), Expect = 3e-14
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 47226 TTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGACAATGCAGGAA 47285
|||||||||| ||| |||| || |||||| || | |||||||| ||||||||||| ||||
Sbjct 206939 TTTTAGGACTCTATAAAAAGTCTGGGAAATTAGTTTTTCTCGGATTAGACAATGCCGGAA 206880
Query 47286 AAACGGCATTACTCCACATGCTCAAA 47311
|||| ||||| | |||||||| |||
Sbjct 206879 AAACAACATTATTGCACATGCTTAAA 206854
>seq11199
Length=1679328
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 44119 TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT 44178
||| ||||| ||| | || || ||||||| ||||||||||| ||||| || ||||| ||
Sbjct 643615 TTTAGGAGAGCGATTAGTAGCATTTGCAGCAGTGGAAGGCATCTTCTTCTCTGGATCATT 643674
Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238
||| ||||| | ||||| |||||| |||| ||||||| || | || | || |||||
Sbjct 643675 TGCTGCCATCTACTGGTTGAAGAAAAGAGGCCTGATGCCCGGACTCACCTACTCCAATGA 643734
Query 44239 GTTAATAAGTCGTGATGA 44256
| || || | |||||
Sbjct 643735 ACTCATCAGCAGAGATGA 643752
>seq6006
Length=139621
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963
|| ||| | || ||||| ||| | | ||||| || || || || || || || ||||||
Sbjct 86883 CGATTTACTCAGGAAGTCCAAGTGACTGAAGCCCGTTGCTTCTACGGTTTCCAGATTGCC 86824
Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| || || || |||||||||||||| |||| || || ||||||||||||
Sbjct 86823 ATGGAAAACATCCACTCTGAAATGTACAGTCTGTTGATTGACACCTACATCAAAGAT 86767
>seq19302
Length=2714443
Score = 87.8 bits (96), Expect = 1e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 47226 TTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGACAATGCAGGAA 47285
|||||||||| ||| |||| || |||||| || | |||||||| ||||||||||| ||||
Sbjct 1839029 TTTTAGGACTCTATAAAAAGTCTGGGAAATTAGTTTTTCTCGGATTAGACAATGCCGGAA 1838970
Query 47286 AAACGGCATTACTCCACATGCTCAAA 47311
|||| |||| | |||||||| |||
Sbjct 1838969 AAACAACATTGTTGCACATGCTTAAA 1838944
>seq11759
Length=1730004
Score = 82.4 bits (90), Expect = 6e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | ||||| ||||| |||| |||||| ||| ||||||||||| |||| |||||
Sbjct 149264 TTTGTCATTTTTCCTATTCAGTATCCTGACATCTGGAAAATGTACAAACAAGCTCAGGCT 149205
Query 43760 TCATTTTGGACAG 43772
||||| |||||||
Sbjct 149204 TCATTCTGGACAG 149192
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397040956820410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |