Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq11831 86.0 7e-12
seq85036 82.4 8e-11
seq3398 82.4 8e-11
>seq11831
Length=614722
Score = 86.0 bits (94), Expect = 7e-12
Identities = 96/126 (76%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||| || | |||||| ||||| || || || | || || ||||||||
Sbjct 557321 GTGAAGATGTAACGAGGGCTGGCAGCATCTTTCCCGCCGTTGATACGGGTACCAAACTGA 557380
Query 152089 CC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147
|| ||| |||| |||| ||||| |||||| |||||| || ||||| |||||||||||
Sbjct 557381 CCGAGA-GGCTGAAGGATGTTGATATTGTTGCTGCCCACAAAGTTCTGGGCCAAATTCAC 557439
Query 152148 AATCGT 152153
|| ||
Sbjct 557440 GATAGT 557445
>seq85036
Length=2202
Score = 82.4 bits (90), Expect = 8e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 53320 TCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGA 53379
||| ||||| || ||||||||| | || |||||||||||| || || || ||||| ||
Sbjct 576 TCAAATGTCTAGTTGCTTCCTGCTTGCTATGAAGGATGACAGTATTGAGGGGATCTATGA 635
Query 53380 GACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|| || ||| |||| |||| ||| || |||| |||| ||||||||
Sbjct 636 CACCCTGAAGCAGTGCGCCCTCATTTCTAAGTCTGCGGGAGGTATCGG 683
>seq3398
Length=854497
Score = 82.4 bits (90), Expect = 8e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 53320 TCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGA 53379
||| ||||| || ||||||||| | || |||||||||||| || || || ||||| ||
Sbjct 21782 TCAAATGTCTAGTTGCTTCCTGCTTGCTATGAAGGATGACAGTATTGAGGGGATCTATGA 21841
Query 53380 GACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|| || ||| |||| |||| ||| || |||| |||| ||||||||
Sbjct 21842 CACCCTGAAGCAGTGCGCCCTCATTTCTAAGTCTGCGGGAGGTATCGG 21889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546629917983600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |