Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq13169 93.3 6e-14 >seq13169 Length=2235454 Score = 93.3 bits (102), Expect = 6e-14 Identities = 215/322 (67%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 1181253 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1181312 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||| |||| Sbjct 1181313 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1181372 Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 | || || | | || |||||| | ||| | | || ||| ||| Sbjct 1181373 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1181430 Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 || | ||| | | || | |||| ||||||| ||| || || || ||| ||| || Sbjct 1181431 CCAGCAAACTGGAGCATATGATCTACGCCTCCTGGTCTCGAGTTCAAGCAGACATCAACT 1181490 Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989 ||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || | Sbjct 1181491 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1181550 Query 13990 TGGACTTCCCGCTCAAGACCAA 14011 || ||||| | || ||||| Sbjct 1181551 CTGATTTCCCCATTAAAACCAA 1181572 Score = 93.3 bits (102), Expect = 6e-14 Identities = 215/322 (67%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 1210955 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1211014 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||| |||| Sbjct 1211015 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1211074 Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 | || || | | || |||||| | ||| | | || ||| ||| Sbjct 1211075 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1211132 Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 || | ||| | | ||| | |||| ||| ||| ||| || || || ||| ||| || Sbjct 1211133 CCAGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAACT 1211192 Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989 ||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || | Sbjct 1211193 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1211252 Query 13990 TGGACTTCCCGCTCAAGACCAA 14011 || ||||| | || ||||| Sbjct 1211253 CTGATTTCCCCATTAAAACCAA 1211274 Score = 89.7 bits (98), Expect = 7e-13 Identities = 214/322 (66%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 1214706 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1214765 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||| |||| Sbjct 1214766 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1214825 Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 | || || | | || |||||| | ||| | | || ||| ||| Sbjct 1214826 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1214883 Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 | | ||| | | ||| | |||| ||| ||| ||| || || || ||| ||| || Sbjct 1214884 TCAGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAACT 1214943 Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989 ||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || | Sbjct 1214944 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1215003 Query 13990 TGGACTTCCCGCTCAAGACCAA 14011 || ||||| | || ||||| Sbjct 1215004 CTGATTTCCCCATTAAAACCAA 1215025 Score = 84.2 bits (92), Expect = 3e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 1237818 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1237877 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC 13807 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||||| Sbjct 1237878 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTC 1237933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658033673848320