Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq13169 93.3 6e-14
>seq13169
Length=2235454
Score = 93.3 bits (102), Expect = 6e-14
Identities = 215/322 (67%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751
|| || ||||| || ||||| || ||||| || | |||||||||||||| || | |||
Sbjct 1181253 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1181312
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809
||||| ||||| ||| | || || || | ||||| || ||||||||| ||| ||||
Sbjct 1181313 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1181372
Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869
| || || | | || |||||| | ||| | | || ||| |||
Sbjct 1181373 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1181430
Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929
|| | ||| | | || | |||| ||||||| ||| || || || ||| ||| ||
Sbjct 1181431 CCAGCAAACTGGAGCATATGATCTACGCCTCCTGGTCTCGAGTTCAAGCAGACATCAACT 1181490
Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989
||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || |
Sbjct 1181491 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1181550
Query 13990 TGGACTTCCCGCTCAAGACCAA 14011
|| ||||| | || |||||
Sbjct 1181551 CTGATTTCCCCATTAAAACCAA 1181572
Score = 93.3 bits (102), Expect = 6e-14
Identities = 215/322 (67%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751
|| || ||||| || ||||| || ||||| || | |||||||||||||| || | |||
Sbjct 1210955 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1211014
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809
||||| ||||| ||| | || || || | ||||| || ||||||||| ||| ||||
Sbjct 1211015 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1211074
Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869
| || || | | || |||||| | ||| | | || ||| |||
Sbjct 1211075 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1211132
Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929
|| | ||| | | ||| | |||| ||| ||| ||| || || || ||| ||| ||
Sbjct 1211133 CCAGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAACT 1211192
Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989
||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || |
Sbjct 1211193 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1211252
Query 13990 TGGACTTCCCGCTCAAGACCAA 14011
|| ||||| | || |||||
Sbjct 1211253 CTGATTTCCCCATTAAAACCAA 1211274
Score = 89.7 bits (98), Expect = 7e-13
Identities = 214/322 (66%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751
|| || ||||| || ||||| || ||||| || | |||||||||||||| || | |||
Sbjct 1214706 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1214765
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809
||||| ||||| ||| | || || || | ||||| || ||||||||| ||| ||||
Sbjct 1214766 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 1214825
Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869
| || || | | || |||||| | ||| | | || ||| |||
Sbjct 1214826 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 1214883
Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929
| | ||| | | ||| | |||| ||| ||| ||| || || || ||| ||| ||
Sbjct 1214884 TCAGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAACT 1214943
Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGA 13989
||||| ||| ||| | || || ||| |||||| ||| ||||||||| || || |
Sbjct 1214944 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCA 1215003
Query 13990 TGGACTTCCCGCTCAAGACCAA 14011
|| ||||| | || |||||
Sbjct 1215004 CTGATTTCCCCATTAAAACCAA 1215025
Score = 84.2 bits (92), Expect = 3e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751
|| || ||||| || ||||| || ||||| || | |||||||||||||| || | |||
Sbjct 1237818 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 1237877
Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC 13807
||||| ||||| ||| | || || || | ||||| || ||||||||| |||||
Sbjct 1237878 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTC 1237933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658033673848320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |