Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq13143 100 2e-16
seq20611 93.3 3e-14
>seq13143
Length=1991197
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||||| || | ||| || ||| |||||| || ||||| || || ||
Sbjct 1626615 GCCCCCACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1626556
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | |||||||| || || || || || || | |||||| ||||| || ||
Sbjct 1626555 CAGCGTGCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGG 1626496
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657
| || |||||||| |||||| | || ||| | ||| ||||| | ||| |
Sbjct 1626495 AATGCCTTCCTTGTCCTGGATCTTG-GCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAA 1626437
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || || || || || | ||||||||||| ||||||||
Sbjct 1626436 CCTCGAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
>seq20611
Length=922441
Score = 93.3 bits (102), Expect = 3e-14
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || || ||||||||||||| ||| | ||| ||| ||||| ||||| || || ||
Sbjct 520317 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGAC 520376
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| ||| || | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 520377 AATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 520436
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656
| || || || || |||| || | || ||| | ||| |||| ||| | |||
Sbjct 520437 ATACCTTCTTTATCCTGGATC-TTAGCCTTGACGTTCTCAATGGTGTCACTTGG--CTCA 520493
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || | ||| || || || || || || || || || || |||||||||
Sbjct 520494 ACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 520544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314400943811906
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |