Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1581 143 2e-29 seq13143 131 1e-25 seq20611 123 2e-23 seq46 122 8e-23 >seq1581 Length=2594311 Score = 143 bits (158), Expect = 2e-29 Identities = 182/250 (73%), Gaps = 3/250 (1%) Strand=Plus/Minus Query 26965 ATAAATTTTTTAATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTA 27024 ||| ||||||| |||||| |||||||| ||||| ||||| || || |||||| | | Sbjct 1373417 ATATATTTTTTTGTTTATAG---ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCA 1373361 Query 27025 TTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACA 27084 | || ||||| || || || |||| | ||||||| ||||| ||| || || |||| Sbjct 1373360 TCACCCTTGAGGTCGAGCCAAGCGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACA 1373301 Query 27085 AAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACA 27144 |||||||||| || || || || ||| | | || | ||| |||||||| ||||||| Sbjct 1373300 AAGAAGGCATTCCCCCTGACCAGCAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATG 1373241 Query 27145 GTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTT 27204 || || | || || |||||||| || || ||||| ||||| ||| |||| ||||| Sbjct 1373240 GTCGCACACTGTCTGACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTC 1373181 Query 27205 TGCGGGGTGG 27214 | |||| || Sbjct 1373180 TCAGGGGAGG 1373171 >seq13143 Length=1991197 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| |||||| | || || || || || || || | Sbjct 1624594 ATGCAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1624653 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| |||||||| |||||||| || || || || Sbjct 1624654 GACACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 1624713 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || |||||||| | || | || ||||||||| Sbjct 1624714 CAGCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAAC 1624773 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | ||| | || ||||| || | ||||| || Sbjct 1624774 ATCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGTAT 1624823 Score = 98.7 bits (108), Expect = 9e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 ||||||| |||||| ||||| |||||||| |||||||| || || || || |||||| Sbjct 1625451 ATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGCGT 1625510 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173 | || | || ||||| || |||||||| | || | || ||||||||||| || Sbjct 1625511 CTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACATCCAG 1625570 Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||| | ||| | || ||||| || | ||||| || Sbjct 1625571 AAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGAGGTGGTAT 1625614 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || ||||| || |||||||| || || || || |||||||| || | |||||||||| Sbjct 1626244 AAGATCCAAGATAAGGAAGGCATTCCTCCTGACCAGCAGCGTTTGATCTTCGCCGGCAAA 1626303 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || |||||||| | || | ||||| |||||||| || || ||||| ||| | ||| Sbjct 1626304 CAGTTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAAGAGTCCACCCTCCAT 1626363 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || ||||| || | ||||| || Sbjct 1626364 CTTGTCCTGCGTCTGAGAGGTGGTAT 1626389 >seq20611 Length=922441 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||| |||||| | || || ||||| || || || Sbjct 520544 CATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCAAG 520485 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| ||||| || || || || |||||||| || || || || || Sbjct 520484 TGACACCATTGAGAACGTCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCA 520425 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||||||||||| ||||||| || || | || || ||||| Sbjct 520424 GCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAA 520365 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| ||||| ||||| ||||| ||| |||| |||||| | |||| || Sbjct 520364 CATCCAAAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAGGGGAGG 520317 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| | || || ||||| || || || | Sbjct 520771 ATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGC 520712 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || || |||||||||||||| || || || || Sbjct 520711 GACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 520652 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||||||||| ||||||| | || | || || |||||| Sbjct 520651 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGACTACAAC 520592 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || || ||| | || ||||| | |||| ||||| Sbjct 520591 ATCCAGAAAGAGTCCACTTTGCATCTTGTGCTGCGTCTCAGGGGAGGCAT 520542 >seq46 Length=2207375 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| |||||| | || || || || || || || | Sbjct 2031010 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 2031069 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || || || || |||||||| || || || || Sbjct 2031070 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAG 2031129 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||||||||| |||||||| | || | ||||| |||||| Sbjct 2031130 CAGCGTTTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTGTCCGACTACAAC 2031189 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTT 27204 || || || ||||| ||| | ||| | || |||||| Sbjct 2031190 ATCCAGAAAGAGTCCACCCTCCATCTTGTCCTGCGTT 2031226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434452591520640