Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq20636 107 2e-18 seq87 93.3 3e-14 seq19376 87.8 1e-12 >seq20636 Length=5413328 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 3250 TGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGG 3309 ||| ||||||||| |||| || || ||||||||||| || || ||||||||||||||||| Sbjct 4987240 TGAAGAGCTCTTCAGAGACGGAGTGAACTGGGGGCGGATCGTCGCTTTCTTTGAGTTTGG 4987299 Query 3310 TGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGC 3369 ||| ||||||||||| ||| |||| | | || | |||| || || || ||||| Sbjct 4987300 TGGGACCATGTGTGTGGAGAGCTTCAACCGGGAGATGGCGTCCCAGGTAGATAATATTGC 4987359 Query 3370 CGCGTGGATGACAGACCAGCTG 3391 |||||||||||| | ||| Sbjct 4987360 ACACTGGATGACAGACTACCTG 4987381 >seq87 Length=1358813 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 3251 GATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGT 3310 || |||||||| ||| || || ||||||||||| || | |||||||||||||||||| Sbjct 438265 GAAGAGCTCTTTAAAGACGGAGTGAACTGGGGGCGGATCATCGCTTTCTTTGAGTTTGGT 438206 Query 3311 GGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCC 3370 || ||||||||||| ||||| || | | || | |||| || || || ||||| Sbjct 438205 GGGACCATGTGTGTGGAGAGCGTTAACCGGGAGATGGCGTCCCAGGTAGATAATATTGCA 438146 Query 3371 GCGTGGATGACAGACCAGCTG 3391 |||||||||||| | ||| Sbjct 438145 CACTGGATGACAGACTACCTG 438125 >seq19376 Length=955028 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || || || | ||| ||||||||||| |||| || ||||||||| | || ||||| Sbjct 784198 AGTCCAGTGATGTGGGCAATCATGTAGGTCAGCAGTGCGTAGCTGGCGATGTTGAAAGGC 784257 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 ||||||||||| || || | || | |||||||| || || || | ||| |||| || Sbjct 784258 ACACCCAGACCGATATCACCAGAGCGCTGGTACAGCTGACACGACAACTCACCGTCTGAC 784317 Query 118654 ACATAAAACTGAC 118666 || |||||||||| Sbjct 784318 ACGTAAAACTGAC 784330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414043982860648