Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq20636 107 2e-18
seq87 93.3 3e-14
seq19376 87.8 1e-12
>seq20636
Length=5413328
Score = 107 bits (118), Expect = 2e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 3250 TGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGG 3309
||| ||||||||| |||| || || ||||||||||| || || |||||||||||||||||
Sbjct 4987240 TGAAGAGCTCTTCAGAGACGGAGTGAACTGGGGGCGGATCGTCGCTTTCTTTGAGTTTGG 4987299
Query 3310 TGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGC 3369
||| ||||||||||| ||| |||| | | || | |||| || || || |||||
Sbjct 4987300 TGGGACCATGTGTGTGGAGAGCTTCAACCGGGAGATGGCGTCCCAGGTAGATAATATTGC 4987359
Query 3370 CGCGTGGATGACAGACCAGCTG 3391
|||||||||||| | |||
Sbjct 4987360 ACACTGGATGACAGACTACCTG 4987381
>seq87
Length=1358813
Score = 93.3 bits (102), Expect = 3e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 3251 GATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGT 3310
|| |||||||| ||| || || ||||||||||| || | ||||||||||||||||||
Sbjct 438265 GAAGAGCTCTTTAAAGACGGAGTGAACTGGGGGCGGATCATCGCTTTCTTTGAGTTTGGT 438206
Query 3311 GGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCC 3370
|| ||||||||||| ||||| || | | || | |||| || || || |||||
Sbjct 438205 GGGACCATGTGTGTGGAGAGCGTTAACCGGGAGATGGCGTCCCAGGTAGATAATATTGCA 438146
Query 3371 GCGTGGATGACAGACCAGCTG 3391
|||||||||||| | |||
Sbjct 438145 CACTGGATGACAGACTACCTG 438125
>seq19376
Length=955028
Score = 87.8 bits (96), Expect = 1e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593
|| || || | ||| ||||||||||| |||| || ||||||||| | || |||||
Sbjct 784198 AGTCCAGTGATGTGGGCAATCATGTAGGTCAGCAGTGCGTAGCTGGCGATGTTGAAAGGC 784257
Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653
||||||||||| || || | || | |||||||| || || || | ||| |||| ||
Sbjct 784258 ACACCCAGACCGATATCACCAGAGCGCTGGTACAGCTGACACGACAACTCACCGTCTGAC 784317
Query 118654 ACATAAAACTGAC 118666
|| ||||||||||
Sbjct 784318 ACGTAAAACTGAC 784330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414043982860648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |