Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq20611 100 2e-16 >seq20611 Length=922441 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || ||||||||| |||| || ||||| |||| || |||||||| ||||| |||| Sbjct 520450 GATAAAGAAGGTATTCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAA 520391 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| ||||| || |||||||||||||||||| ||| |||||| |||| ||| Sbjct 520390 GATGGTCGCACATTGTCTGACTACAACATCCAAAAAGAGTCCACCTTGCATCTGGTGTTG 520331 Query 28003 CGT 28005 ||| Sbjct 520330 CGT 520328 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| || ||||| |||| || |||||||| ||||| |||| Sbjct 520678 GACAAAGAAGGCATTCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAA 520619 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| ||||| || ||||||||||| |||||| |||||||||| | || || Sbjct 520618 GATGGCCGCACATTGTCTGACTACAACATCCAGAAAGAGTCCACTTTGCATCTTGTGCTG 520559 Query 28003 CGT 28005 ||| Sbjct 520558 CGT 520556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355490790911214