Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq20611 100 2e-16
>seq20611
Length=922441
Score = 100 bits (110), Expect = 2e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
|| ||||||||| |||| || ||||| |||| || |||||||| ||||| ||||
Sbjct 520450 GATAAAGAAGGTATTCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAA 520391
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | |||| ||||| || |||||||||||||||||| ||| |||||| |||| |||
Sbjct 520390 GATGGTCGCACATTGTCTGACTACAACATCCAAAAAGAGTCCACCTTGCATCTGGTGTTG 520331
Query 28003 CGT 28005
|||
Sbjct 520330 CGT 520328
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||||||||| |||| || ||||| |||| || |||||||| ||||| ||||
Sbjct 520678 GACAAAGAAGGCATTCCCCCTGACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAA 520619
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | |||| ||||| || ||||||||||| |||||| |||||||||| | || ||
Sbjct 520618 GATGGCCGCACATTGTCTGACTACAACATCCAGAAAGAGTCCACTTTGCATCTTGTGCTG 520559
Query 28003 CGT 28005
|||
Sbjct 520558 CGT 520556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355490790911214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |