Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq46 194 4e-44
seq13143 188 2e-42
seq1581 159 8e-34
seq20611 150 4e-31
>seq46
Length=2207375
Score = 194 bits (214), Expect = 4e-44
Identities = 172/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| ||||||||||| || |||||||| || || | ||||| | |||||||
Sbjct 2030765 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2030706
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||||||||||| |||||||||||
Sbjct 2030705 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 2030646
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || |||||| || || |||||||| | ||||||||||| ||||| |||
Sbjct 2030645 TGGATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2030586
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || ||||| ||||| | |||||| ||
Sbjct 2030585 TTGCCAGTCAGCGTCTTCACAAAGATCTGCATCTT 2030551
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| ||||||||||| || |||||||| || || | ||||| | |||||||
Sbjct 2030993 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2030934
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || ||||||||||||| |||||||| |||
Sbjct 2030933 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2030874
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || |||||||| | ||||||||||| ||||| |||
Sbjct 2030873 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2030814
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 2030813 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2030782
Score = 179 bits (198), Expect = 9e-40
Identities = 167/212 (79%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| ||||||||||| || |||||||| || || | ||||| | ||||||
Sbjct 2031654 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCC 2031595
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| || || || || |||||||||| ||||||||||||
Sbjct 2031594 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 2031535
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || ||||||||| | ||||| || | |||||| |||
Sbjct 2031534 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATGGTC 2031475
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 2031474 TTGCCAGTCAGCGTCTTGACGAAGATCTGCAT 2031443
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || || |||||||| || |||||||| || || | |||||
Sbjct 2031892 ACGAAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 2031833
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||||||||||||| || |||||||| || || || ||||||||||||| ||
Sbjct 2031832 GCGTCCATCTTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCC 2031773
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||| ||||| || ||| || || || |||||||| | |||||||||||
Sbjct 2031772 TTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAG 2031713
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | ||||| || || | ||||||
Sbjct 2031712 GGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031671
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||||||||| |||||||| || || | || || | |||||||
Sbjct 2031221 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 2031162
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| ||||| |||||||| | || || ||||||||||||| |||||||| |||
Sbjct 2031161 TCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 2031102
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || |||||||| | ||||||||||| ||||| |||
Sbjct 2031101 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 2031042
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| || || | ||||||
Sbjct 2031041 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2031010
Score = 170 bits (188), Expect = 4e-37
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| ||||||||||| || |||||||| || || | ||||| | |||||||
Sbjct 2031426 AGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 2031367
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
||||||||||| || || ||||| || || || ||||||||||||| ||||||||||||
Sbjct 2031366 TCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2031307
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || |||||||| | ||||||||||| ||||| ||
Sbjct 2031306 TGGATCTTGGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTT 2031247
Query 211083 TTTCCCGTGAGAGTCTTTACAA 211104
|| || || | ||||| ||||
Sbjct 2031246 TTACCAGTCAAGGTCTTCACAA 2031225
>seq13143
Length=1991197
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| || || || |||||||| || |||||||| || || | || ||
Sbjct 1626609 ACGAAGACGCAGGACGAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGT 1626550
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||||||| ||||||||||| |||||||| || || || ||||||||||||| ||
Sbjct 1626549 GCGTCCATCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCC 1626490
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||||||||||||| |||||||| || |||||||| | |||||||||||
Sbjct 1626489 TTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAG 1626430
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || || || || ||||| | ||||||
Sbjct 1626429 GGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 1626388
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||| || || |||||||| ||||| | || || | |||||||
Sbjct 1624805 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1624746
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| || ||||| || || || ||||||||||| | |||||||||||
Sbjct 1624745 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1624686
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || ||| ||||| || |||||||| | ||||||||||| ||||| |||
Sbjct 1624685 TGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1624626
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || ||||| || || | |||||| ||
Sbjct 1624625 TTGCCAGTCAGCGTCTTGACGAAGATCTGCATCTT 1624591
Score = 131 bits (144), Expect = 4e-25
Identities = 119/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||| || || |||||||| ||||| | || || | |||||||
Sbjct 1625596 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCT 1625537
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||||||| || ||||| || || || ||||||||||| | |||||||||||
Sbjct 1625536 TCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 1625477
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTG 211052
||||| || ||| ||||| || ||||||
Sbjct 1625476 TGGATTTTAGCTTTGACGTTCTCAATGGTG 1625447
Score = 123 bits (136), Expect = 6e-23
Identities = 104/128 (81%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || || ||||||||||| |||||||| || || | || || | |||||||
Sbjct 1626371 AGGACAAGATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCT 1626312
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| ||||| |||||||| | || || ||||||||||||| |||||||| ||
Sbjct 1626311 TCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCT 1626252
Query 211023 TGGATCTT 211030
||||||||
Sbjct 1626251 TGGATCTT 1626244
Score = 109 bits (120), Expect = 1e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034
|| || ||||| || || || ||||||||||||| ||||||||||| ||||| || |
Sbjct 1625752 CCAGCTAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATTTTAGCT 1625693
Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
|| ||||| || ||||||||| | |||||||| || ||||| ||||| || || ||
Sbjct 1625692 TTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGT 1625633
Query 211095 GTCTTTACAAACACCTGCAT 211114
||||| || || | ||||||
Sbjct 1625632 GTCTTGACGAAGATCTGCAT 1625613
>seq1581
Length=2594311
Score = 159 bits (176), Expect = 8e-34
Identities = 156/200 (78%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
||||||||||| |||||||| || || | || || | |||||||||||||| |||||
Sbjct 1373201 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCTTCCAGCTGTTTGCCA 1373260
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|||||||| || | || |||||||| |||| ||||| ||||||||||||||| ||
Sbjct 1373261 GCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTTGCCTTG 1373320
Query 211038 ACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
||||| || |||||||| |||| || ||||| || ||||| ||||| || |||||
Sbjct 1373321 ACGTTCTCAATGGTGTC---GCTTGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGG 1373377
Query 211095 GTCTTTACAAACACCTGCAT 211114
|| || ||||| | ||||||
Sbjct 1373378 GTTTTGACAAAGATCTGCAT 1373397
>seq20611
Length=922441
Score = 150 bits (166), Expect = 4e-31
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || | |||||||||||| |||||||| || || | | || | ||||||
Sbjct 520560 AGCACAAGATGCAAAGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCATCT 520619
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| ||||| || ||||| | | || |||||||| |||| ||||| ||||||
Sbjct 520620 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 520679
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079
|||||||| || ||||| || || ||||| |||| |||||||| || |||||
Sbjct 520680 TGGATCTTAGCCTTGACGTTCTCAATTGTGTC---GCTTGGCTCAACCTCAAGGGTGATG 520736
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || ||||| || || ||||| | ||||||
Sbjct 520737 GTCTTACCAGTGAGGGTTTTGACAAAGATCTGCAT 520771
Score = 136 bits (150), Expect = 9e-27
Identities = 151/200 (76%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|||||||||||||||||||| || || | | || | |||||||||||||| |||||
Sbjct 520347 GTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATCTTCCAGCTGTTTGCCG 520406
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| | | || |||||||| |||| ||||| || ||||||||||| ||
Sbjct 520407 GCAAAGATCAACCTCTGCTGGTCAGGGGGAATACCTTCTTTATCCTGGATCTTAGCCTTG 520466
Query 211038 ACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
||||| || ||||||||| ||| |||||||| || ||||| ||||| || || |
Sbjct 520467 ACGTTCTCAATGGTGTCA---CTTGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAAG 520523
Query 211095 GTCTTTACAAACACCTGCAT 211114
||||| || || | ||||||
Sbjct 520524 GTCTTGACGAAGATCTGCAT 520543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1157879482209930
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