Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq19376 138 9e-28 >seq19376 Length=955028 Score = 138 bits (152), Expect = 9e-28 Identities = 135/174 (78%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| || || || | ||||||||||||||| || ||| Sbjct 784198 AGTCCAGTGATGTGGGCAATCATGTAGGTCAGCAGTGCGTAGCTGGCGATGTTGAAAGGC 784257 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || || || || || || | |||||| ||||| ||||| | ||| ||||| | Sbjct 784258 ACACCCAGACCGATATCACCAGAGCGCTGGTACAGCTGACACGACAACTCACCGTCTGAC 784317 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCT 29887 |||||||||||||||| ||||||||||| || | ||||| ||| || |||| Sbjct 784318 ACGTAAAACTGACACAACGCATGGCACGGGGGCAACGCCATCAGAGGCAGGTCT 784371 Score = 105 bits (116), Expect = 5e-18 Identities = 113/147 (77%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT-GCTCGAA 30075 || ||||||||||| || || || || || ||||| ||||| || |||| | ||| ||| Sbjct 787078 AAGTGCCTCCACTGAAAGCCATAAACGGGACCCAGATCTCCTTCCTCCCGATCGCT-GAA 787136 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| |||| |||| ||| || ||||| ||||| || |||||||| | || |||||||| Sbjct 787137 GCCGTTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGATTCTCACACCCTTCTC 787196 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCC 30162 || |||||||||| || || || || Sbjct 787197 TGACAGCTCTTTGGCATTGGTTGAACC 787223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405739064332252