Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq11759 102 7e-17
seq11199 100 2e-16
seq16819 98.7 8e-16
seq6006 82.4 7e-11
>seq11759
Length=1730004
Score = 102 bits (112), Expect = 7e-17
Identities = 103/133 (77%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 4567 AACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626
||||| | |||||||| || ||||| || || | || | ||||||||| | || || |
Sbjct 147485 AACCT-CATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCGCTTT 147543
Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686
| || | ||| | || || |||||||| ||||| ||||| ||||||||||| || ||||
Sbjct 147544 TCTTCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCTACTGCTGCAA 147603
Query 4687 ACGCTACTAATCG 4699
| |||||||||||
Sbjct 147604 ATGCTACTAATCG 147616
>seq11199
Length=1679328
Score = 100 bits (110), Expect = 2e-16
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| |||||||| || ||||| || || | || | ||||||||| | ||||| || ||
Sbjct 643752 TCATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTTTCTTC 643693
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
| ||| | || || |||||||| ||||| ||||| |||||||| || || ||||| |||
Sbjct 643692 AACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAAATGCT 643633
Query 4692 ACTAATCG 4699
||||||||
Sbjct 643632 ACTAATCG 643625
>seq16819
Length=1945512
Score = 98.7 bits (108), Expect = 8e-16
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| |||||||| || ||||| || || || || | ||| ||||| | |||||||| ||
Sbjct 739162 TCATCTCTGCTGATAAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCTTT 739103
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| || |||| ||||| |||||||||||||| || ||||| || || ||||| ||
Sbjct 739102 AGCCAGAAAATAGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 739043
Query 4692 AC 4693
||
Sbjct 739042 AC 739041
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868
|| |||| ||||| ||||| || | || || ||||||||||| || || ||||| ||
Sbjct 738603 GGATCTTTGATATAGGTGTCAATCAACAGACTGTACATTTCAGAGTGAATGTTTTCCATT 738544
Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
|||||||| || ||||| ||||| | ||||| || ||||| || || | | |||||
Sbjct 738543 GCAATCTGGAAACCGTAGAAGCAACGGGCTTCGGTCACTTGGACCTCCTGAGTAAATC 738486
>seq6006
Length=139621
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868
|| |||| || || ||||| || | || || ||||||||||| || || ||||| ||
Sbjct 86765 GGATCTTTGATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATG 86824
Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
|||||||| || ||||| ||||| | ||||| || ||||| ||||| | | |||||
Sbjct 86825 GCAATCTGGAAACCGTAGAAGCAACGGGCTTCAGTCACTTGGACTTCCTGAGTAAATC 86882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426603653722106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |