Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq7720 147 3e-30 seq9107 143 4e-29 seq5998 127 3e-24 seq9617 120 4e-22 seq19268 111 2e-19 seq20662 109 8e-19 >seq7720 Length=2841229 Score = 147 bits (162), Expect = 3e-30 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 ||||| ||| | || ||||| | || || || ||||| || ||||||||| | ||||| Sbjct 1872939 TTGACAATCTCAAAGCCCACTTTGCCACCAAAAGTGCTCGGTTTCCAGTACTCAGGGGAA 1872998 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| || |||| || |||||||||||| | || || |||| || | ||| || Sbjct 1872999 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 1873058 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || ||||||||||||| | |||||| || |||| || || || || | ||||||| Sbjct 1873059 TCCCCAAAGATGGCGTTGGTCCTGGGCTTCTCAACCAGCAAGCCAGTATAAAACTCCACA 1873118 Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584 || || || | ||||| | | ||||| ||||| ||||||||||||||| Sbjct 1873119 GCATCCACATGCCCGTACAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1873172 Score = 127 bits (140), Expect = 3e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || |||| |||||| || |||||||| ||||| ||||||| ||| || ||||| Sbjct 1874073 TCACCAATAAGGATGAGCCGTGTGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1874132 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || | || || | ||| ||||| | ||||||||| | |||||||| || || |||||| Sbjct 1874133 TCCTTCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCAGATGGTAGCATACATC 1874192 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 ||||| || || ||||| ||||| ||||| ||||| || || | || || || Sbjct 1874193 ATGAGTCCTGGAACCAGTCCAAAGGCCTCATGACCCACGGCAAAGCGACGAGACTCAGGT 1874252 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471 || | ||||| ||| ||||| || || || || |||| | || ||||| | ||| Sbjct 1874253 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1874312 Query 9472 CCGTC 9476 || || Sbjct 1874313 CCATC 1874317 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||| ||| || | || ||||| |||||||| || || ||||| || | | | | Sbjct 1875230 TCACCTGCGACTCCCATTGGTGTTGGGCAATCGTGTGGGACAGGAGGCAGTGTGCGAGTG 1875289 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 || ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| ||| Sbjct 1875290 TAGTAGGAGAGATTAGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATAAA 1875349 Query 10028 GGAGGGCTGTCAATCAAATCGG 10049 || ||||| ||||||| || || Sbjct 1875350 GGTGGGCTATCAATCAGATGGG 1875371 >seq9107 Length=1685290 Score = 143 bits (158), Expect = 4e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 ||||| ||| | || ||||| | || || ||||| || || ||||||||| | ||||| Sbjct 1329087 TTGACAATCTCAAAGCCCACTTTGCCACCAAAGGTACTTGGTTTCCAGTACTCGGGGGAA 1329028 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| || |||| || |||||||||||| | || || |||| || | ||| || Sbjct 1329027 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 1328968 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || ||||||| ||||| | |||||| || |||| | || | || ||||||||| Sbjct 1328967 TCCCCAAAGATGGTGTTGGTCCTGGGCTTCTCAACCAGCAGCCCAGCATAAAGCTCCACA 1328908 Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584 || || || || ||||| | | ||||| ||||| ||||||||||||||| Sbjct 1328907 GCATCCACATCCCCGTACAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1328854 Score = 127 bits (140), Expect = 3e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || |||| |||||| || | |||||| ||||| ||||||| ||| || ||||| Sbjct 1327944 TCACCAATAAGGATGAGCCGTGCGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1327885 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || || || || | ||| ||||| | ||||||||| | ||||| || ||||| |||||| Sbjct 1327884 TCCTGCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCATATGGTGGCATACATC 1327825 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411 ||||| || || ||||| ||||| || || ||||| || || | || | || || Sbjct 1327824 ATGAGTCCGGGAACCAGTCCAAAGGCTTCGTGACCAACGGCAAAGCGACGGGACTCAGGT 1327765 Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471 || | ||||| ||| ||||| || || || || |||| | || ||||| | ||| Sbjct 1327764 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1327705 Query 9472 CCGTC 9476 || || Sbjct 1327704 CCATC 1327700 Score = 107 bits (118), Expect = 3e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||| ||| || | || |||||||||||||| || || ||||| || | | | | Sbjct 1326771 TCACCTGCGACTCCCATTGGTGTTGGACAATCGTGCGGGACAGGAGGCAGCGTGCGAGTG 1326712 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 || ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| |||| Sbjct 1326711 TAGTAGGAGAGATTTGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATATA 1326652 Query 10028 GGAGGGCTGTCAATCAAATCGG 10049 |||||||| ||||||| || || Sbjct 1326651 GGAGGGCTATCAATCAGATGGG 1326630 >seq5998 Length=1230033 Score = 127 bits (140), Expect = 3e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| | || || || ||||| ||| ||||||| | || || || || | || Sbjct 828500 AATCCCACTTTCCCACCAAATGTGCTAGGCATCCAGTATTCAGGAGAACAAATAGCATTT 828441 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||||||||||||||| ||| | || || |||| ||| | || |||| || || | Sbjct 828440 CCCATGAGGCCTTTGAGAGAGTAGGGCGCTCCCATCTCCACCATAGTCTCCCCAAACACA 828381 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541 |||||||| ||||| || ||||| ||||| || || |||||||| || || || | || Sbjct 828380 GCGTTGGGTCGGGGTTTCTCCAC-AAGAAGGCCAGTATACAGCTCAACCGCATCTATGTG 828322 Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590 ||||| || | | | |||||| || | |||||| |||||||||||| Sbjct 828321 ACCGTACAGCTGCATCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 828273 >seq9617 Length=2863312 Score = 120 bits (132), Expect = 4e-22 Identities = 172/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 || ||||| ||||| | |||||||| ||||| ||||| || | ||| ||||||||| Sbjct 2728179 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTAGGATGTTCT 2728238 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 |||||||| | ||| ||||| | |||||| || | ||||| | ||||||||||| || Sbjct 2728239 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACATACTG 2728298 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCG-GGCAC 9413 || || || | ||||||||| | ||||| || | ||||| || || | | || || Sbjct 2728299 AGACCCGGCAGCAGGCCAAACACTTCTTGCCCAATGGCCAGCTGC-TGCTCCGGTGGGAC 2728357 Query 9414 TTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473 || || ||| |||| | ||| | | ||| || | |||||||||||| ||||| Sbjct 2728358 AGACGGCGGGTAGCTCATTTTGACCGGTGCATCTAGTACTGTGGGGGGATACATCTCACC 2728417 Score = 89.7 bits (98), Expect = 7e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || || || || ||||||||||||||| | |||||||| | || ||||||||||| Sbjct 2720965 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAACAGGATTTCCCATGAGGCCT 2721024 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 || ||||| || || ||||||| || | ||||| ||||| || || || | || Sbjct 2721025 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCGCACCAGATCGT 2721084 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 | ||| || | ||| | | | ||| | ||||| ||| || | || || || || || Sbjct 2721085 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATCACCATACAGTTCC 2721144 Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 ||||| ||| ||||| | ||||||||| Sbjct 2721145 TCTAGTTCTTTAGCCATCTCTTCTTCTCCTGT 2721176 >seq19268 Length=1198490 Score = 111 bits (122), Expect = 2e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294 || ||||| ||||| | |||||||| ||||| ||||| || | ||| |||||||||| Sbjct 414420 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTTGGATGTTCT 414361 Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354 |||||||| | ||| ||||| | |||||| || | ||||| | |||||||||| || Sbjct 414360 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACAAACTG 414301 Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACT 9414 || || || | ||| ||||| | ||||| || | ||||| ||| | | || || Sbjct 414300 AGACCCGGCAGCAGTCCAAACACTTCTTGCCCAATGGCCAGCTGCAGCTCTGGCGGGACA 414241 Query 9415 TCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473 || || ||| |||| | ||| | | ||| || | |||||| || || ||||| Sbjct 414240 GACGGTGGGTAGTTCATTTTGACCGGTGCATCTAGCACTGTGGGGGGGTATATCTCACC 414182 Score = 89.7 bits (98), Expect = 7e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434 || || || || ||||||||||||||| | |||||||| || || ||||||||||| Sbjct 434192 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAATAGGATTTCCCATGAGGCCT 434133 Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494 || ||||| || || ||||||| || | ||||| ||||| || || | || || Sbjct 434132 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCACACCAGGTCGT 434073 Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554 | ||| || | ||| | | | ||| | ||||| ||| || | | || || || | Sbjct 434072 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATGACCATACAGTTTC 434013 Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 ||||| ||| ||||| ||||||||||| Sbjct 434012 TCTAGTTCTTTAGCCATCTCTTTTTCTCCTGT 433981 >seq20662 Length=778419 Score = 109 bits (120), Expect = 8e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || ||||| | || || || ||||| ||| ||||||| | || || || | | || Sbjct 620424 AATCCCACTTTCCCACCAAATGTGCTCGGCATCCAGTATTCAGGAGAACAAACAGCATTT 620483 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 ||||||| |||||||| ||| | || || |||| ||| | || |||| || || | Sbjct 620484 CCCATGAGACCTTTGAGAGAGTAGGGGGCTCCCATCTCTACCATAGTCTCCCCAAACACA 620543 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541 |||||||| | ||| || ||||| ||||| || | |||||||| || || || | || Sbjct 620544 GCGTTGGGTCTGGGTTTCTCCAC-AAGAAGGCCAGGATACAGCTCAACCGCGTCTATGTG 620602 Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590 ||||| || | | | |||||| || | |||||| |||||||||||| Sbjct 620603 ACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 620651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716109007025280