Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq7720 147 3e-30
seq9107 143 4e-29
seq5998 127 3e-24
seq9617 120 4e-22
seq19268 111 2e-19
seq20662 109 8e-19
>seq7720
Length=2841229
Score = 147 bits (162), Expect = 3e-30
Identities = 173/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| ||| | || ||||| | || || || ||||| || ||||||||| | |||||
Sbjct 1872939 TTGACAATCTCAAAGCCCACTTTGCCACCAAAAGTGCTCGGTTTCCAGTACTCAGGGGAA 1872998
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| || |||| || |||||||||||| | || || |||| || | ||| ||
Sbjct 1872999 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 1873058
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||||||||| | |||||| || |||| || || || || | |||||||
Sbjct 1873059 TCCCCAAAGATGGCGTTGGTCCTGGGCTTCTCAACCAGCAAGCCAGTATAAAACTCCACA 1873118
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| || || | ||||| | | ||||| ||||| |||||||||||||||
Sbjct 1873119 GCATCCACATGCCCGTACAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1873172
Score = 127 bits (140), Expect = 3e-24
Identities = 175/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || |||| |||||| || |||||||| ||||| ||||||| ||| || |||||
Sbjct 1874073 TCACCAATAAGGATGAGCCGTGTGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1874132
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| | || || | ||| ||||| | ||||||||| | |||||||| || || ||||||
Sbjct 1874133 TCCTTCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCAGATGGTAGCATACATC 1874192
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
||||| || || ||||| ||||| ||||| ||||| || || | || || ||
Sbjct 1874193 ATGAGTCCTGGAACCAGTCCAAAGGCCTCATGACCCACGGCAAAGCGACGAGACTCAGGT 1874252
Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 1874253 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1874312
Query 9472 CCGTC 9476
|| ||
Sbjct 1874313 CCATC 1874317
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||| ||| || | || ||||| |||||||| || || ||||| || | | | |
Sbjct 1875230 TCACCTGCGACTCCCATTGGTGTTGGGCAATCGTGTGGGACAGGAGGCAGTGTGCGAGTG 1875289
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| |||
Sbjct 1875290 TAGTAGGAGAGATTAGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATAAA 1875349
Query 10028 GGAGGGCTGTCAATCAAATCGG 10049
|| ||||| ||||||| || ||
Sbjct 1875350 GGTGGGCTATCAATCAGATGGG 1875371
>seq9107
Length=1685290
Score = 143 bits (158), Expect = 4e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| ||| | || ||||| | || || ||||| || || ||||||||| | |||||
Sbjct 1329087 TTGACAATCTCAAAGCCCACTTTGCCACCAAAGGTACTTGGTTTCCAGTACTCGGGGGAA 1329028
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| || |||| || |||||||||||| | || || |||| || | ||| ||
Sbjct 1329027 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 1328968
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||| ||||| | |||||| || |||| | || | || |||||||||
Sbjct 1328967 TCCCCAAAGATGGTGTTGGTCCTGGGCTTCTCAACCAGCAGCCCAGCATAAAGCTCCACA 1328908
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| || || || ||||| | | ||||| ||||| |||||||||||||||
Sbjct 1328907 GCATCCACATCCCCGTACAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1328854
Score = 127 bits (140), Expect = 3e-24
Identities = 175/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || |||| |||||| || | |||||| ||||| ||||||| ||| || |||||
Sbjct 1327944 TCACCAATAAGGATGAGCCGTGCGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1327885
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| || || || | ||| ||||| | ||||||||| | ||||| || ||||| ||||||
Sbjct 1327884 TCCTGCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCATATGGTGGCATACATC 1327825
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
||||| || || ||||| ||||| || || ||||| || || | || | || ||
Sbjct 1327824 ATGAGTCCGGGAACCAGTCCAAAGGCTTCGTGACCAACGGCAAAGCGACGGGACTCAGGT 1327765
Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 1327764 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1327705
Query 9472 CCGTC 9476
|| ||
Sbjct 1327704 CCATC 1327700
Score = 107 bits (118), Expect = 3e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||| ||| || | || |||||||||||||| || || ||||| || | | | |
Sbjct 1326771 TCACCTGCGACTCCCATTGGTGTTGGACAATCGTGCGGGACAGGAGGCAGCGTGCGAGTG 1326712
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| ||||
Sbjct 1326711 TAGTAGGAGAGATTTGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATATA 1326652
Query 10028 GGAGGGCTGTCAATCAAATCGG 10049
|||||||| ||||||| || ||
Sbjct 1326651 GGAGGGCTATCAATCAGATGGG 1326630
>seq5998
Length=1230033
Score = 127 bits (140), Expect = 3e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||||| | || || || ||||| ||| ||||||| | || || || || | ||
Sbjct 828500 AATCCCACTTTCCCACCAAATGTGCTAGGCATCCAGTATTCAGGAGAACAAATAGCATTT 828441
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||||||||||||||| ||| | || || |||| ||| | || |||| || || |
Sbjct 828440 CCCATGAGGCCTTTGAGAGAGTAGGGCGCTCCCATCTCCACCATAGTCTCCCCAAACACA 828381
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541
|||||||| ||||| || ||||| ||||| || || |||||||| || || || | ||
Sbjct 828380 GCGTTGGGTCGGGGTTTCTCCAC-AAGAAGGCCAGTATACAGCTCAACCGCATCTATGTG 828322
Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590
||||| || | | | |||||| || | |||||| ||||||||||||
Sbjct 828321 ACCGTACAGCTGCATCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 828273
>seq9617
Length=2863312
Score = 120 bits (132), Expect = 4e-22
Identities = 172/240 (72%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| ||||| ||||| | |||||||| ||||| ||||| || | ||| |||||||||
Sbjct 2728179 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTAGGATGTTCT 2728238
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
|||||||| | ||| ||||| | |||||| || | ||||| | ||||||||||| ||
Sbjct 2728239 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACATACTG 2728298
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCG-GGCAC 9413
|| || || | ||||||||| | ||||| || | ||||| || || | | || ||
Sbjct 2728299 AGACCCGGCAGCAGGCCAAACACTTCTTGCCCAATGGCCAGCTGC-TGCTCCGGTGGGAC 2728357
Query 9414 TTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473
|| || ||| |||| | ||| | | ||| || | |||||||||||| |||||
Sbjct 2728358 AGACGGCGGGTAGCTCATTTTGACCGGTGCATCTAGTACTGTGGGGGGATACATCTCACC 2728417
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| || || || ||||||||||||||| | |||||||| | || |||||||||||
Sbjct 2720965 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAACAGGATTTCCCATGAGGCCT 2721024
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
|| ||||| || || ||||||| || | ||||| ||||| || || || | ||
Sbjct 2721025 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCGCACCAGATCGT 2721084
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
| ||| || | ||| | | | ||| | ||||| ||| || | || || || || ||
Sbjct 2721085 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATCACCATACAGTTCC 2721144
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
||||| ||| ||||| | |||||||||
Sbjct 2721145 TCTAGTTCTTTAGCCATCTCTTCTTCTCCTGT 2721176
>seq19268
Length=1198490
Score = 111 bits (122), Expect = 2e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| ||||| ||||| | |||||||| ||||| ||||| || | ||| ||||||||||
Sbjct 414420 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTTGGATGTTCT 414361
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
|||||||| | ||| ||||| | |||||| || | ||||| | |||||||||| ||
Sbjct 414360 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACAAACTG 414301
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACT 9414
|| || || | ||| ||||| | ||||| || | ||||| ||| | | || ||
Sbjct 414300 AGACCCGGCAGCAGTCCAAACACTTCTTGCCCAATGGCCAGCTGCAGCTCTGGCGGGACA 414241
Query 9415 TCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473
|| || ||| |||| | ||| | | ||| || | |||||| || || |||||
Sbjct 414240 GACGGTGGGTAGTTCATTTTGACCGGTGCATCTAGCACTGTGGGGGGGTATATCTCACC 414182
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| || || || ||||||||||||||| | |||||||| || || |||||||||||
Sbjct 434192 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAATAGGATTTCCCATGAGGCCT 434133
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
|| ||||| || || ||||||| || | ||||| ||||| || || | || ||
Sbjct 434132 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCACACCAGGTCGT 434073
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
| ||| || | ||| | | | ||| | ||||| ||| || | | || || || |
Sbjct 434072 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATGACCATACAGTTTC 434013
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
||||| ||| ||||| |||||||||||
Sbjct 434012 TCTAGTTCTTTAGCCATCTCTTTTTCTCCTGT 433981
>seq20662
Length=778419
Score = 109 bits (120), Expect = 8e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||||| | || || || ||||| ||| ||||||| | || || || | | ||
Sbjct 620424 AATCCCACTTTCCCACCAAATGTGCTCGGCATCCAGTATTCAGGAGAACAAACAGCATTT 620483
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
||||||| |||||||| ||| | || || |||| ||| | || |||| || || |
Sbjct 620484 CCCATGAGACCTTTGAGAGAGTAGGGGGCTCCCATCTCTACCATAGTCTCCCCAAACACA 620543
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541
|||||||| | ||| || ||||| ||||| || | |||||||| || || || | ||
Sbjct 620544 GCGTTGGGTCTGGGTTTCTCCAC-AAGAAGGCCAGGATACAGCTCAACCGCGTCTATGTG 620602
Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590
||||| || | | | |||||| || | |||||| ||||||||||||
Sbjct 620603 ACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 620651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716109007025280
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