Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq46 163 7e-35
seq13143 158 3e-33
seq1581 156 1e-32
seq20611 143 6e-29
>seq46
Length=2207375
Score = 163 bits (180), Expect = 7e-35
Identities = 162/208 (78%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || |||||||| || | || || || || |||||||||||||| | ||| || |
Sbjct 2031013 CAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2031070
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| || ||||| || ||||| |||||||
Sbjct 2031071 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAGC 2031130
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||||||||| |||||| | ||||||||| | ||||| |||| || |||
Sbjct 2031131 AGCGTTTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTGTCCGACTACAACA 2031190
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| ||||| || || || ||||||||
Sbjct 2031191 TCCAGAAAGAGTCCACCCTCCATCTTGT 2031218
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || ||||| || || || || || || || |||||||||||||| | ||| || |
Sbjct 2030785 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2030842
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| || ||||| || ||||| |||||||
Sbjct 2030843 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAGC 2030902
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || ||||| ||||||||| | || || |||| || |||
Sbjct 2030903 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2030962
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 2030963 TCCAGAAGGAGTCCACTCTCCACCTGGT 2030990
Score = 145 bits (160), Expect = 2e-29
Identities = 158/208 (76%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || |||||||| || | || || || || |||||||||||||| | ||| || |
Sbjct 2031674 CAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2031731
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| |||||| || || || ||||| ||||| || ||||| |||||||
Sbjct 2031732 ACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 2031791
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || ||||| ||||||||| | || || |||| || |||
Sbjct 2031792 AGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2031851
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || ||||| ||
Sbjct 2031852 TCCAGAAGGAGTCCACCCTCCATCTCGT 2031879
Score = 141 bits (156), Expect = 2e-28
Identities = 152/199 (76%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACACCATCG 177990
||||| || | || || ||||| |||||||||||||| | ||| || |||||||| |
Sbjct 2031227 GTGAAGACCTTGACTGGTAAAACCATCACCCTCGAGGTTG--AGCCCAGCGACACCATAG 2031284
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
|||||||||| ||||| |||||||| ||||| || ||||| |||||||| || || |
Sbjct 2031285 AGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGA 2031344
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || || || ||||| ||||||||| | || || |||| || ||| |||| || |
Sbjct 2031345 TCTTTGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACATCCAGAAGG 2031404
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || || ||
Sbjct 2031405 AGTCCACTCTCCACCTGGT 2031423
Score = 136 bits (150), Expect = 1e-26
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || || ||||| || || || || || || |||||||||||||| | ||| || |
Sbjct 2030557 CAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2030614
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| || ||| || || || ||||| ||||| || ||||| |||||||
Sbjct 2030615 ACACCATTGAGAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 2030674
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || ||||| ||||||||| | || || |||| || |||
Sbjct 2030675 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2030734
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 2030735 TCCAGAAGGAGTCCACTCTCCACCTGGT 2030762
Score = 118 bits (130), Expect = 3e-21
Identities = 152/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || || || || || || ||||| | || || || || |||
Sbjct 2031446 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTTTGGAAGTTGA--GCCCAGTG 2031503
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||| ||||| || ||||| || ||||
Sbjct 2031504 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAGC 2031563
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || ||||| || |||||| | || || | || || |||
Sbjct 2031564 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAACA 2031623
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || || || || ||
Sbjct 2031624 TCCAGAAGGAGTCCACTCTCCACCTGGT 2031651
>seq13143
Length=1991197
Score = 158 bits (174), Expect = 3e-33
Identities = 161/208 (77%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || || |||||||| || || || || || |||||||||||||| | ||| || |
Sbjct 1626391 CAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 1626448
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||| || ||||| |||||||| ||||| || ||||| |||||||
Sbjct 1626449 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGC 1626508
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || |||||||| || || ||||| ||||||||| | || || |||| || |||
Sbjct 1626509 AGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGATGGACGCACGCTGTCCGACTACAACA 1626568
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || |||||||| ||
Sbjct 1626569 TCCAGAAGGAGTCCACCCTGCATCTCGT 1626596
Score = 154 bits (170), Expect = 4e-32
Identities = 168/221 (76%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981
|| || ||||| || || || || || || || |||||||||||||| | ||| || |
Sbjct 1624597 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 1624654
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||||||| || || || ||||| ||||| |||||||| |||||||
Sbjct 1624655 ACACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGC 1624714
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || ||||| || || || ||| | ||||||||| | || || | ||||| |||
Sbjct 1624715 AGCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACA 1624774
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || ||||| || || |||||||| || | || |||
Sbjct 1624775 TCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 1624815
Score = 122 bits (134), Expect = 2e-22
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|||||| |||||||||||| || || || ||||| ||||| |||||||| ||||||||
Sbjct 1625447 CACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCA 1625506
Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102
|| || ||||| || || || ||| | ||||||||| | || || | ||||| ||| |
Sbjct 1625507 GCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACAT 1625566
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||| || ||||| || || |||||||| || | || |||
Sbjct 1625567 CCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 1625606
Score = 109 bits (120), Expect = 1e-18
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
||||| || || || ||||| || ||||| |||||||| || | ||||||||||| |||
Sbjct 1626244 AAGATCCAAGATAAGGAAGGCATTCCTCCTGACCAGCAGCGTTTGATCTTCGCCGGCAAA 1626303
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
||| | ||||||||| | ||||| |||| || ||| |||| ||||| || || || |||
Sbjct 1626304 CAGTTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAAGAGTCCACCCTCCAT 1626363
Query 178125 CTTGTTTTGAGACTCAGA 178142
||||| || | || |||
Sbjct 1626364 CTTGTCCTGCGTCTGAGA 1626381
Score = 96.9 bits (106), Expect = 8e-15
Identities = 106/139 (76%), Gaps = 4/139 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || || || || || || |||||||| ||||| || || |||
Sbjct 1625616 CAGATCTTCGTCAAGACACTGACTGGCAAGACCATCACCCTTGAGGTTGA--GCCCAGTG 1625673
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| |||||||||||| || || || ||||| ||||| || ||||| |||||||
Sbjct 1625674 ACACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 1625733
Query 178042 AACGACTTATCTTCGCCGG 178060
| || || ||||| || ||
Sbjct 1625734 AGCGTCTGATCTTAGCTGG 1625752
>seq1581
Length=2594311
Score = 156 bits (172), Expect = 1e-32
Identities = 168/221 (76%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980
|| || || || ||||| ||||| || || || |||||||| ||||| || ||||
Sbjct 1373394 CAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCAAGC--- 1373338
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
|||||||| ||||||||||| |||||| |||||||||||||| || || || ||||||
Sbjct 1373337 GACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 1373278
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | || |||||||| || |||||||| |||||||| | || || | || || |||
Sbjct 1373277 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGACTACAAC 1373218
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| ||||| || || ||||||| || || | |||||
Sbjct 1373217 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAG 1373177
>seq20611
Length=922441
Score = 143 bits (158), Expect = 6e-29
Identities = 165/221 (75%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980
|| || || || ||||| ||||| || || || |||||||| ||||| || ||||
Sbjct 520768 CAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGC--- 520712
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||| || ||||||||||| ||||| |||||||||||||| || || || ||||||
Sbjct 520711 GACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 520652
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| | | ||||| ||||| |||||||| |||||||| | || | | || || |||
Sbjct 520651 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGACTACAAC 520592
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| ||||| || || |||||||||| || | |||||
Sbjct 520591 ATCCAGAAAGAGTCCACTTTGCATCTTGTGCTGCGTCTCAG 520551
Score = 140 bits (154), Expect = 8e-28
Identities = 164/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || ||||| || || | ||||| || || |||||||| ||||| || || ||
Sbjct 520540 CAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGA--GCCAAGTG 520483
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| ||||| |||||||| || || || |||||||
Sbjct 520482 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCAGC 520423
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | | ||||| ||||| |||||||| |||||||| | || | | || || |||
Sbjct 520422 AGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAACA 520363
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||||||||| || || ||||||| || ||| | |||||
Sbjct 520362 TCCAAAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAG 520323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202409743136308
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