Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq46 163 7e-35 seq13143 158 3e-33 seq1581 156 1e-32 seq20611 143 6e-29 >seq46 Length=2207375 Score = 163 bits (180), Expect = 7e-35 Identities = 162/208 (78%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || | || || || || |||||||||||||| | ||| || | Sbjct 2031013 CAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2031070 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| ||||| || ||||| || ||||| ||||||| Sbjct 2031071 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAGC 2031130 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || | ||||||||||| |||||| | ||||||||| | ||||| |||| || ||| Sbjct 2031131 AGCGTTTGATCTTCGCCGGCAAACAGTTGGAAGATGGACGCACTCTGTCCGACTACAACA 2031190 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| ||||| || || || |||||||| Sbjct 2031191 TCCAGAAAGAGTCCACCCTCCATCTTGT 2031218 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || ||||| || || || || || || || |||||||||||||| | ||| || | Sbjct 2030785 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2030842 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| ||||| || ||||| || ||||| ||||||| Sbjct 2030843 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAGC 2030902 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| ||||||||| | || || |||| || ||| Sbjct 2030903 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2030962 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 2030963 TCCAGAAGGAGTCCACTCTCCACCTGGT 2030990 Score = 145 bits (160), Expect = 2e-29 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || | || || || || |||||||||||||| | ||| || | Sbjct 2031674 CAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2031731 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| |||||| || || || ||||| ||||| || ||||| ||||||| Sbjct 2031732 ACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 2031791 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| ||||||||| | || || |||| || ||| Sbjct 2031792 AGCGTCTGATCTTCGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2031851 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || ||||| || Sbjct 2031852 TCCAGAAGGAGTCCACCCTCCATCTCGT 2031879 Score = 141 bits (156), Expect = 2e-28 Identities = 152/199 (76%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--GACACCATCG 177990 ||||| || | || || ||||| |||||||||||||| | ||| || |||||||| | Sbjct 2031227 GTGAAGACCTTGACTGGTAAAACCATCACCCTCGAGGTTG--AGCCCAGCGACACCATAG 2031284 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 |||||||||| ||||| |||||||| ||||| || ||||| |||||||| || || | Sbjct 2031285 AGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGA 2031344 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| || || || ||||| ||||||||| | || || |||| || ||| |||| || | Sbjct 2031345 TCTTTGCTGGTAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACATCCAGAAGG 2031404 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 2031405 AGTCCACTCTCCACCTGGT 2031423 Score = 136 bits (150), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || || || || || || |||||||||||||| | ||| || | Sbjct 2030557 CAGATCTTTGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 2030614 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || ||| || || || ||||| ||||| || ||||| ||||||| Sbjct 2030615 ACACCATTGAGAATGTGAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 2030674 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| ||||||||| | || || |||| || ||| Sbjct 2030675 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 2030734 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 2030735 TCCAGAAGGAGTCCACTCTCCACCTGGT 2030762 Score = 118 bits (130), Expect = 3e-21 Identities = 152/208 (73%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || || || || || || ||||| | || || || || ||| Sbjct 2031446 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACTTTGGAAGTTGA--GCCCAGTG 2031503 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || ||||| || |||| Sbjct 2031504 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAGC 2031563 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| || |||||| | || || | || || ||| Sbjct 2031564 AGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTGTCTGACTACAACA 2031623 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || || || || || Sbjct 2031624 TCCAGAAGGAGTCCACTCTCCACCTGGT 2031651 >seq13143 Length=1991197 Score = 158 bits (174), Expect = 3e-33 Identities = 161/208 (77%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || |||||||| || || || || || |||||||||||||| | ||| || | Sbjct 1626391 CAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 1626448 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||| || ||||| |||||||| ||||| || ||||| ||||||| Sbjct 1626449 ACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGC 1626508 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || |||||||| || || ||||| ||||||||| | || || |||| || ||| Sbjct 1626509 AGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGATGGACGCACGCTGTCCGACTACAACA 1626568 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || |||||||| || Sbjct 1626569 TCCAGAAGGAGTCCACCCTGCATCTCGT 1626596 Score = 154 bits (170), Expect = 4e-32 Identities = 168/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || ||||| || || || || || || || |||||||||||||| | ||| || | Sbjct 1624597 CAGATCTTCGTCAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGCG 1624654 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||||||| || || || ||||| ||||| |||||||| ||||||| Sbjct 1624655 ACACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGC 1624714 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || ||||| || || || ||| | ||||||||| | || || | ||||| ||| Sbjct 1624715 AGCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACA 1624774 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || ||||| || || |||||||| || | || ||| Sbjct 1624775 TCCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 1624815 Score = 122 bits (134), Expect = 2e-22 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 177983 CACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||| |||||||||||| || || || ||||| ||||| |||||||| |||||||| Sbjct 1625447 CACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCA 1625506 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 || || ||||| || || || ||| | ||||||||| | || || | ||||| ||| | Sbjct 1625507 GCGTCTGATCTTTGCTGGCAAGCAGTTGGAAGATGGACGCACGCTGTCTGATTACAACAT 1625566 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||| || ||||| || || |||||||| || | || ||| Sbjct 1625567 CCAGAAGGAATCCACCCTCCATCTTGTCCTGCGTCTGAGA 1625606 Score = 109 bits (120), Expect = 1e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| || || || ||||| || ||||| |||||||| || | ||||||||||| ||| Sbjct 1626244 AAGATCCAAGATAAGGAAGGCATTCCTCCTGACCAGCAGCGTTTGATCTTCGCCGGCAAA 1626303 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||| | ||||||||| | ||||| |||| || ||| |||| ||||| || || || ||| Sbjct 1626304 CAGTTGGAAGATGGACGCACTCTGTCCGACTACAACATCCAGAAAGAGTCCACCCTCCAT 1626363 Query 178125 CTTGTTTTGAGACTCAGA 178142 ||||| || | || ||| Sbjct 1626364 CTTGTCCTGCGTCTGAGA 1626381 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || || || || || || |||||||| ||||| || || ||| Sbjct 1625616 CAGATCTTCGTCAAGACACTGACTGGCAAGACCATCACCCTTGAGGTTGA--GCCCAGTG 1625673 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||||||| || || || ||||| ||||| || ||||| ||||||| Sbjct 1625674 ACACCATTGAGAACGTCAAAGCTAAAATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 1625733 Query 178042 AACGACTTATCTTCGCCGG 178060 | || || ||||| || || Sbjct 1625734 AGCGTCTGATCTTAGCTGG 1625752 >seq1581 Length=2594311 Score = 156 bits (172), Expect = 1e-32 Identities = 168/221 (76%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || || || ||||| ||||| || || || |||||||| ||||| || |||| Sbjct 1373394 CAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCAAGC--- 1373338 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 |||||||| ||||||||||| |||||| |||||||||||||| || || || |||||| Sbjct 1373337 GACACCATTGAGAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 1373278 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || | || |||||||| || |||||||| |||||||| | || || | || || ||| Sbjct 1373277 CAGAGGCTGATCTTCGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGACTACAAC 1373218 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||| ||||| || || ||||||| || || | ||||| Sbjct 1373217 ATCCAGAAAGAGTCCACCTTGCATCTGGTGCTGCGTCTCAG 1373177 >seq20611 Length=922441 Score = 143 bits (158), Expect = 6e-29 Identities = 165/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 || || || || ||||| ||||| || || || |||||||| ||||| || |||| Sbjct 520768 CAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAGCCAAGC--- 520712 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| || ||||||||||| ||||| |||||||||||||| || || || |||||| Sbjct 520711 GACACAATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 520652 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || | | ||||| ||||| |||||||| |||||||| | || | | || || ||| Sbjct 520651 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGACTACAAC 520592 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||| ||||| || || |||||||||| || | ||||| Sbjct 520591 ATCCAGAAAGAGTCCACTTTGCATCTTGTGCTGCGTCTCAG 520551 Score = 140 bits (154), Expect = 8e-28 Identities = 164/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || ||||| || || | ||||| || || |||||||| ||||| || || || Sbjct 520540 CAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGA--GCCAAGTG 520483 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| ||||| |||||||| || || || ||||||| Sbjct 520482 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGATAAAGAAGGTATTCCCCCTGACCAGC 520423 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| |||||||| | || | | || || ||| Sbjct 520422 AGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAACA 520363 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141 |||||||||| || || ||||||| || ||| | ||||| Sbjct 520362 TCCAAAAAGAGTCCACCTTGCATCTGGTGTTGCGTCTCAG 520323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202409743136308