Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq453 86.0 5e-12 >seq453 Length=1395482 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889 || |||| ||||| || ||||| || || || ||||| || | || ||| | || Sbjct 606288 AATACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATCT 606347 Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949 ||||||||||| || ||| | || || ||||||||||| ||| | ||| |||||||| Sbjct 606348 TCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCTTTGTCC 606407 Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009 || || ||||| | | | || |||| ||||| || | ||| ||||| Sbjct 606408 TGGATCTTTGCCTTTACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGTC 606467 Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || || | ||||||||||| || ||||| Sbjct 606468 TTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 606499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414414769642138