Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq453 93.3 4e-14 seq475 82.4 6e-11 >seq453 Length=1395482 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 ||| |||| ||| | || || ||||| || |||||||| || || || | ||| Sbjct 606287 CAATACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCATC 606346 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| |||||||| ||| | || |||||||| ||||| ||| | |||||||||||| Sbjct 606347 TTCCAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCTTTGTC 606406 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || ||| || || | ||| | |||| || || || | ||| ||||| Sbjct 606407 CTGGATCTTTGCCTTTACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATGGT 606466 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAAC 20216 ||||| || | ||||||||||| || ||||| | ||||| Sbjct 606467 CTTGCCAGTGAGGGTTTTGACAAAGATCTGCATCTATAAAC 606507 >seq475 Length=1111492 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||||| ||| | || || |||||||| |||||||| || || || | ||| Sbjct 249650 CAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGACAATGTGCGACCATC 249591 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| |||||||| ||| | || | |||||| || || ||| | |||||||||||| Sbjct 249590 TTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 249531 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || || || || | ||| | |||| || || || | ||| ||||| Sbjct 249530 CTGGATCTTAGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGT 249471 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| || ||||| || || ||||| Sbjct 249470 CTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 249438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419427258210837