Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1186 89.7 4e-13 >seq1186 Length=611208 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 ||| || ||| |||||| || |||||||| |||| | || | || |||||||| Sbjct 454459 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTG 454400 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || | |||||||||||| || | | |||||||||| || || Sbjct 454399 CTTACCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 454340 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | ||||||| ||| | | ||| ||||| || ||||| || || || Sbjct 454339 GGCCTTGACGTTCTCTATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGT 454280 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || |||||||| |||||||| Sbjct 454279 CAAGGTCTTCACAAAGATCTGCAT 454256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421090623913277