Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq453 107 2e-18 seq475 89.7 4e-13 >seq453 Length=1395482 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| || ||||||||||| ||||| || || ||||| ||| | || ||| Sbjct 606505 TTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAG 606446 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | |||||||| ||| | ||||| ||| || || ||||||||| | ||| | Sbjct 606445 CCAAGCGACACCATTGAGAACGTAAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCT 606386 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 |||||||| || || || | ||| |||||||| | ||||||| || || | || Sbjct 606385 GATCAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGAC 606326 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||| || |||||||| || | ||| |||| ||| Sbjct 606325 TACAACATCCAGAAAGAGTCCACCTTGCATCTGGTATTG 606287 >seq475 Length=1111492 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| || ||||||||||| ||||| || || ||||| ||| | || ||| Sbjct 248064 TTATAGATGCAGATCTTTGTCAAAACCCTCACTGGTAAGACCATCACCCTTGAGGTTGAG 248123 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | |||||||| ||| | || || || || || ||||||||| | ||| | Sbjct 248124 CCAAGCGACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCT 248183 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || ||||| || | || | ||| |||||||| | ||||||| | || || | || Sbjct 248184 GACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGAC 248243 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||| || |||||||| || | ||| | ||| || Sbjct 248244 TACAACATCCAGAAAGAGTCCACCTTGCATCTTGTGCTG 248282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425181863785240