Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq453 105 6e-18 seq475 82.4 6e-11 >seq453 Length=1395482 Score = 105 bits (116), Expect = 6e-18 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 111179 GTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGG 111238 ||||| | ||||| || ||||||||||| | || ||||| ||||| ||| | || | Sbjct 606507 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCCTTGAGGTCG 606448 Query 111239 AACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111298 | || ||||| | ||| | ||||| ||| || |||||||||||| ||||| Sbjct 606447 AGCCAAGCGACACCATTGAGAACGTAAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCC 606388 Query 111299 TCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCG 111358 ||||| || ||||| || | ||| |||||||| |||||||| | || || | | Sbjct 606387 CTGATCAGCAGAGGCTGATCTTTGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTG 606328 Query 111359 ATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111416 | || || || || ||||| || || | ||| | || |||||||| | || ||||| Sbjct 606327 ACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTATTGCGTCTCAGGGGAGGCAA 606270 >seq475 Length=1111492 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || ||||| || |||| ||||| ||||| ||| | || || || ||| Sbjct 249438 ATGCAGATCTTCGTCAAGACCTTGACAGGCAAGACCATCACCCTTGAGGTTGAGCCAAGC 249497 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || || || |||||||||||| ||||| || || Sbjct 249498 GACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 249557 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||| | || | ||| |||||||| |||||||| | || || | || || || Sbjct 249558 CAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGTCGCACATTGTCTGACTACAAC 249617 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCT 111404 || |||||||| || || | ||| | ||||||||||| Sbjct 249618 ATCCAAAAAGAGTCCACCTTGCATCTGGTGTTGCGTCT 249655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422878742043400