Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1186 86.0 5e-12 >seq1186 Length=611208 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || ||| ||| || || || ||||| ||||| Sbjct 449122 GCCTCCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 449063 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| || || || ||||| ||||||||||| | || Sbjct 449062 GAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCAGGAGG 449003 Query 48659 AACGCCCTCCTTGTC 48673 || ||| |||||||| Sbjct 449002 AATGCCTTCCTTGTC 448988 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || ||| ||| || || || ||||| ||||| Sbjct 453799 GCCTCCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 453740 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| || || || ||||| ||||||||||| | || Sbjct 453739 GAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCAGGAGG 453680 Query 48659 AACGCCCTCCTTGTC 48673 || ||| |||||||| Sbjct 453679 AATGCCTTCCTTGTC 453665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380792390991471