Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2831 95.1 1e-14 seq588 95.1 1e-14 seq362 87.8 2e-12 >seq2831 Length=39540 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||| ||||||||||| || ||| ||||| Sbjct 27572 TCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGCAACCGCAAGAGC 27513 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || ||||| || || | ||||| || ||| |||||||| Sbjct 27512 AACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAGATTGTAGAGTAC 27453 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 27452 ACCAGTAAGGATGAG 27438 >seq588 Length=1544836 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||||||||||||||| || ||| || || Sbjct 1280418 TCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGCAACCGCAAAAGC 1280359 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || || || || || | ||||| |||||| |||||||| Sbjct 1280358 AACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTAGAGTAC 1280299 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 1280298 ACCAGTAAGGATGAG 1280284 >seq362 Length=1554118 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| |||||| || |||||||| |||||||| || ||| |||||| ||| | Sbjct 600672 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCCGGGTCTTT-TGCTTCTATTTTCTGGCT 600614 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 |||||| | || |||||||| || || |||||| ||||||||||| | ||||||| Sbjct 600613 AAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTTATCAGCAGAGATGA 600554 Query 65208 GG 65209 || Sbjct 600553 GG 600552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596336363657760