Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq4248 91.5 2e-13 >seq4248 Length=15230 Score = 91.5 bits (100), Expect = 2e-13 Identities = 212/320 (66%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 6670 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 6611 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||||| Sbjct 6610 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCT 6551 Query 13812 GACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCC 13871 || || | | || |||||| | ||| | | || ||| ||||| Sbjct 6550 GAGATCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGGCC 6491 Query 13872 CACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGC 13931 | ||| | | ||| | |||| ||| ||| ||| || || || ||| ||| |||| Sbjct 6490 AGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAACTGC 6431 Query 13932 ATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGCGGGATG 13991 ||| ||| ||| | || || ||| |||||| ||| ||||||||| || || | Sbjct 6430 ATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAACACATGTGGCACT 6371 Query 13992 GACTTCCCGCTCAAGACCAA 14011 || ||||| | || ||||| Sbjct 6370 GATTTCCCCATTAAAACCAA 6351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658481657675520