Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq475 98.7 6e-16 >seq475 Length=1111492 Score = 98.7 bits (108), Expect = 6e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||||||||||| ||| | ||| ||| ||||| ||||| || || || Sbjct 249664 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTTTGGATGTTGTAGTCAGAC 249605 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 249604 AATGTGCGACCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 249545 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656 | || || ||||| |||| || | || ||| | ||| |||| ||| | ||| Sbjct 249544 ATGCCTTCTTTGTCCTGGATC-TTAGCCTTGACGTTCTCAATGGTGTCGCTTGG--CTCA 249488 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| || || || || || || || || || || ||||||||| Sbjct 249487 ACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 249437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314609628715541