Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq706 96.9 3e-15 >seq706 Length=954768 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || ||| |||||||| | ||||||||||| | | || || || ||||| | | Sbjct 720392 GACCTGCCTGTGATGGCGTTGCCCCCGTGCCATGCGTTGTGTCAGTTTTACGTGTCAGAC 720451 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||| |||| || ||||| || || || || || || || || | || ||||| ||| Sbjct 720452 GGTGAGTTGTCGTGTCAGCTGTACCAGCGCTCTGGTGATATCGGTCTGGGTGTGCCTTTC 720511 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| ||||| || |||||||| || || Sbjct 720512 AACATCGCCAGCTACGCACTGCTGACCTACATGATTGCCCA 720552 Score = 96.9 bits (106), Expect = 3e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| || ||||| ||||| || || |||||||| ||||| || | || Sbjct 720552 TGGGCAATCATGTAGGTCAGCAGTGCGTAGCTGGCGATGTTGAAAGGCACACCCAGACCG 720493 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 || || || || || || || ||||| || |||| ||| || | | ||||| || || Sbjct 720492 ATATCACCAGAGCGCTGGTACAGCTGACACGACAACTCACCGTCTGACACGTAAAACTGA 720433 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || | | ||||||||||| | |||||||| ||| || || Sbjct 720432 CACAACGCATGGCACGGGGGCAACGCCATCACAGGCAGGTC 720392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448087146211440