Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq39920 84.2 2e-11 seq29358 84.2 2e-11 >seq39920 Length=384501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| ||||| || |||||||||||||| |||||||| || || |||||||||| Sbjct 182362 CTTTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACCGGACCCAGATCTCCTT 182303 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || | || ||| || ||||| | ||| || || || || |||||||| | Sbjct 182302 CCTCCCGATCGCTAAAGCCGCTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGA 182243 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | ||| || |||| ||||||||| Sbjct 182242 TTCTCACACCCTTCTCTGACAGCTCTTTG 182214 >seq29358 Length=42689 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| ||||| || |||||||||||||| |||||||| || || |||||||||| Sbjct 19137 CTTTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACGGGACCCAGATCTCCTT 19078 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || | || ||| || ||||| | ||| || || || || |||||||| | Sbjct 19077 CCTCCCGATCGCTAAAGCCGTTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGA 19018 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | ||| || |||| ||||||||| Sbjct 19017 TTCTCACACCCTTCTCTGACAGCTCTTTG 18989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360528387488423