Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq39920 84.2 2e-11
seq29358 84.2 2e-11
>seq39920
Length=384501
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||| ||||| || |||||||||||||| |||||||| || || ||||||||||
Sbjct 182362 CTTTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACCGGACCCAGATCTCCTT 182303
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| || | || ||| || ||||| | ||| || || || || |||||||| |
Sbjct 182302 CCTCCCGATCGCTAAAGCCGCTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGA 182243
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| ||| || |||| |||||||||
Sbjct 182242 TTCTCACACCCTTCTCTGACAGCTCTTTG 182214
>seq29358
Length=42689
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||| ||||| || |||||||||||||| |||||||| || || ||||||||||
Sbjct 19137 CTTTGTATTCAGCTCCAAAGTGCCTCCACTGAAAGCCATACACGGGACCCAGATCTCCTT 19078
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| || | || ||| || ||||| | ||| || || || || |||||||| |
Sbjct 19077 CCTCCCGATCGCTAAAGCCGTTCTTATCCAGAAACTCCCTGGAGCCGTTAGCATCCCAGA 19018
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| ||| || |||| |||||||||
Sbjct 19017 TTCTCACACCCTTCTCTGACAGCTCTTTG 18989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360528387488423
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |