Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq15052 95.1 1e-14
seq15895 84.2 3e-11
>seq15052
Length=186981
Score = 95.1 bits (104), Expect = 1e-14
Identities = 173/251 (69%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203
||||||||||| ||||| || | |||||| | |||||| ||| ||| | || | | |
Sbjct 15548 AACTTCTCGAAATTCCAAGCGATGTCGTTTCTGCACACGGGACTCCACACGATAAATTTG 15607
Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263
||||| ||| || | | || ||||| || || || ||| ||||||
Sbjct 15608 GGGTCATTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTAAGGAAG 15667
Query 83264 GCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTC 83323
||||||| || || || || ||||| || ||| |||||| |||||| || ||
Sbjct 15668 ACGAAGAGAGGGTGAGCGGTTTTCCCGTTCACGTCGACCTTCTCCAAGAGCTGGAATTTA 15727
Query 83324 GGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGG 83383
|| || ||||| || ||||||||||| | ||| | ||| || | |||||| |||| ||
Sbjct 15728 GGTTCAAAGCCATTGCCAGGACGGACATACTTTAAGGACGGAAGGATCTCTTCATT-TGT 15786
Query 83384 GC-GTTTTCCT 83393
| ||||||||
Sbjct 15787 ACAGTTTTCCT 15797
>seq15895
Length=1350600
Score = 84.2 bits (92), Expect = 3e-11
Identities = 173/252 (69%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203
|||||||| || ||||| || | ||| || | |||||| ||| ||| |||| | | |
Sbjct 791768 AACTTCTCAAAATTCCAAGCGATGTCATTTCTGCACACAGGACTCCACACAATAAATTTG 791827
Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263
|||||| ||| || | | || ||||| || || || ||| ||||||
Sbjct 791828 GGGTCGTTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTGAGGAAG 791887
Query 83264 GCGAAGAGCGGATGTGCC-CTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322
||||||| || || | ||| | ||||| || || |||||| |||||| || ||
Sbjct 791888 ACGAAGAGAGGGTGAGTGGCTTTC-CCGTTCACGTCAACCTTCTCCAAGAGCTGGAATTT 791946
Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382
|| || ||||| || ||||||||||| ||||| ||| || | |||||| |||| ||
Sbjct 791947 AGGTTCAAAGCCATTGCCAGGACGGACAAACTTCAAGGACGGAAGGATCTCTTCATT-TG 792005
Query 83383 GGC-GTTTTCCT 83393
| ||||||||
Sbjct 792006 TACAGTTTTCCT 792017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 607547450036920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |