Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq15052 95.1 1e-14 seq15895 84.2 3e-11 >seq15052 Length=186981 Score = 95.1 bits (104), Expect = 1e-14 Identities = 173/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203 ||||||||||| ||||| || | |||||| | |||||| ||| ||| | || | | | Sbjct 15548 AACTTCTCGAAATTCCAAGCGATGTCGTTTCTGCACACGGGACTCCACACGATAAATTTG 15607 Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263 ||||| ||| || | | || ||||| || || || ||| |||||| Sbjct 15608 GGGTCATTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTAAGGAAG 15667 Query 83264 GCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTC 83323 ||||||| || || || || ||||| || ||| |||||| |||||| || || Sbjct 15668 ACGAAGAGAGGGTGAGCGGTTTTCCCGTTCACGTCGACCTTCTCCAAGAGCTGGAATTTA 15727 Query 83324 GGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTGG 83383 || || ||||| || ||||||||||| | ||| | ||| || | |||||| |||| || Sbjct 15728 GGTTCAAAGCCATTGCCAGGACGGACATACTTTAAGGACGGAAGGATCTCTTCATT-TGT 15786 Query 83384 GC-GTTTTCCT 83393 | |||||||| Sbjct 15787 ACAGTTTTCCT 15797 >seq15895 Length=1350600 Score = 84.2 bits (92), Expect = 3e-11 Identities = 173/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203 |||||||| || ||||| || | ||| || | |||||| ||| ||| |||| | | | Sbjct 791768 AACTTCTCAAAATTCCAAGCGATGTCATTTCTGCACACAGGACTCCACACAATAAATTTG 791827 Query 83204 GGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAAG 83263 |||||| ||| || | | || ||||| || || || ||| |||||| Sbjct 791828 GGGTCGTTCATGAAGGGCATTGGCTCATCGCTCGGGAATGGAAGTTTCTCCTTGAGGAAG 791887 Query 83264 GCGAAGAGCGGATGTGCC-CTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322 ||||||| || || | ||| | ||||| || || |||||| |||||| || || Sbjct 791888 ACGAAGAGAGGGTGAGTGGCTTTC-CCGTTCACGTCAACCTTCTCCAAGAGCTGGAATTT 791946 Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382 || || ||||| || ||||||||||| ||||| ||| || | |||||| |||| || Sbjct 791947 AGGTTCAAAGCCATTGCCAGGACGGACAAACTTCAAGGACGGAAGGATCTCTTCATT-TG 792005 Query 83383 GGC-GTTTTCCT 83393 | |||||||| Sbjct 792006 TACAGTTTTCCT 792017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607547450036920