Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq16719 96.9 6e-15 >seq16719 Length=811764 Score = 96.9 bits (106), Expect = 6e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944 |||||| ||| |||||| |||||| || || || ||| | || | |||| || || Sbjct 712484 GATAGCGTCAGCGCTATGGTGGTACTACATCTCTAAGGGGGTGGAGTTTCTGGACACAGT 712425 Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004 || ||||| | ||||| || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 712424 GTTCTTCATCATGAGGAAGAAGTTTAATCAGGTCAGCTTTCTGCACGTCTATCACCATAG 712365 Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCAGG 52057 || ||||| | || | ||||| || || || ||| || |||| || |||| Sbjct 712364 CACAATGTTCATCCTGTGGTGGATCGGCATCAAGTGGGTTCCTGGTGGACAGG 712312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921302250146920