Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq147642 95.1 2e-14
seq15552 91.5 2e-13
>seq147642
Length=763
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247
|||||| | | ||||| |||||| || || || ||||| |||||||||||| ||
Sbjct 762 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGC 703
Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307
|| ||||| |||||||| | || ||||||||||||| || || ||||||| ||
Sbjct 702 AACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAG 643
Query 97308 ATTGTAGAGTACGCC 97322
|||||||||||| ||
Sbjct 642 ATTGTAGAGTACACC 628
>seq15552
Length=1137653
Score = 91.5 bits (100), Expect = 2e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247
|||||| | | ||||| |||||| || || || ||||| || ||||||||| ||
Sbjct 1133699 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 1133758
Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307
|| ||||| |||||||| | || |||||||||| || || || ||||||| |||
Sbjct 1133759 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 1133818
Query 97308 ATTGTAGAGTACGCC 97322
|||||||||||| ||
Sbjct 1133819 ATTGTAGAGTACACC 1133833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 739538426099480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |