Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq147642 95.1 2e-14 seq15552 91.5 2e-13 >seq147642 Length=763 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247 |||||| | | ||||| |||||| || || || ||||| |||||||||||| || Sbjct 762 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGC 703 Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307 || ||||| |||||||| | || ||||||||||||| || || ||||||| || Sbjct 702 AACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAG 643 Query 97308 ATTGTAGAGTACGCC 97322 |||||||||||| || Sbjct 642 ATTGTAGAGTACACC 628 >seq15552 Length=1137653 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 97188 GCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTG 97247 |||||| | | ||||| |||||| || || || ||||| || ||||||||| || Sbjct 1133699 GCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGC 1133758 Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307 || ||||| |||||||| | || |||||||||| || || || ||||||| ||| Sbjct 1133759 AACCGCAAAAGCAACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAA 1133818 Query 97308 ATTGTAGAGTACGCC 97322 |||||||||||| || Sbjct 1133819 ATTGTAGAGTACACC 1133833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739538426099480