Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq12251 98.7 8e-16 seq32410 89.7 4e-13 >seq12251 Length=2530766 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| || ||||||||||| ||||| || || || || ||| | || ||| Sbjct 1821339 TTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATCACCCTTGAGGTCGAG 1821398 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | |||||||| ||| | || || |||||| || ||||||||| | ||| | Sbjct 1821399 CCAAGCGACACCATTGAGAACGTCAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCCCT 1821458 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || ||||| || | |||| ||| |||||||| | ||||||| || || | || Sbjct 1821459 GACCAGCAGAGGTTGATTTTTGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTGAC 1821518 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||| || |||||||| || | ||| ||||| || Sbjct 1821519 TACAACATCCAGAAAGAGTCCACCTTGCATCTGGTGCTG 1821557 >seq32410 Length=743546 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 115280 TTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG 115339 ||| | ||||| || ||||||||||| ||||| || || ||||| ||| | || ||| Sbjct 171818 TTATAGATGCAGATCTTTGTCAAAACACTCACTGGTAAGACCATCACCCTTGAGGTTGAG 171877 Query 115340 TCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTT 115399 | |||||||| ||| | || || ||| | || ||||||||| | ||| | Sbjct 171878 CCAAGCGACACCATTGAGAACGTCAAGGCAAAGGTCCAGGACAAAGAAGGCATTCCCCCT 171937 Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459 || ||||| || | || | ||| |||||||| | ||||||| | || || | || Sbjct 171938 GACCAGCAGAGGTTGATCTTTGCCGGCAAACAGCTGGAAGATGGCCGCACATTGTCTGAC 171997 Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||| || |||||||| || | ||| | ||| || Sbjct 171998 TACAACATCCAGAAAGAGTCCACCTTGCATCTTGTGCTG 172036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424492946868760