Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq34520 87.8 2e-12
seq19765 87.8 2e-12
>seq34520
Length=2775569
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || || || |||||| ||||||||||| |||| || ||||| ||||| |||
Sbjct 504769 ATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATGGCAATCTGG 504710
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477
|| |||||||| || | ||||| || | || ||||| |||| ||||| ||| ||
Sbjct 504709 AAACCGTAGAAGCAGCGGGCTTCAGTCACTTGGACTTCCTGAGTAAATCGCTCCAC 504654
>seq19765
Length=1114994
Score = 87.8 bits (96), Expect = 2e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
||||| || || || |||||| ||||||||||| |||| || ||||||||||| |||
Sbjct 413907 ATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATTGCAATCTGG 413848
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477
|| |||||||| || | ||||| || | || || || |||| ||||| ||| ||
Sbjct 413847 AAACCGTAGAAGCAACGGGCTTCGGTCACTTGGACCTCCTGAGTAAATCGCTCCAC 413792
Score = 82.4 bits (90), Expect = 8e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 93603 CAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTG 93662
||||||| || || || ||||| || |||||||| | ||| ||||| || || |||||||
Sbjct 413421 CAGTCCAGAAGGAGGCCTCTGCCTTCTTGTACATCTGCCAGATGTCATGGTACTGAATTG 413362
Query 93663 GAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705
|||| |||||||| || | ||||| || || || | |||||
Sbjct 413361 GAAAAATGACAAAGCGGTGGGGGTTCTCCTTCAGAAGGGGCTC 413319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555718031148520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |