Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq29221 98.7 2e-15
seq43681 95.1 2e-14
seq32347 93.3 9e-14
seq30465 93.3 9e-14
seq9401 93.3 9e-14
seq2157 93.3 9e-14
seq35465 91.5 3e-13
seq32526 91.5 3e-13
seq2533 91.5 3e-13
seq31878 89.7 1e-12
seq29212 89.7 1e-12
seq26626 89.7 1e-12
seq24713 89.7 1e-12
seq12811 89.7 1e-12
seq10122 89.7 1e-12
seq5824 89.7 1e-12
seq2301 89.7 1e-12
seq34907 86.0 1e-11
seq14531 86.0 1e-11
seq20549 84.2 4e-11
>seq29221
Length=532492
Score = 98.7 bits (108), Expect = 2e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 425247 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 425188
Query 142563 CCCCACATCGGGCAGAAGT 142581
|||||| | |||| |||||
Sbjct 425187 CCCCACGTTGGGCGGAAGT 425169
>seq43681
Length=349376
Score = 95.1 bits (104), Expect = 2e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 78032 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 78091
Query 142563 CCCCACATCGGGCAGAA 142579
|||||| | |||| |||
Sbjct 78092 CCCCACGTTGGGCGGAA 78108
>seq32347
Length=2478086
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 867663 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 867722
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 867723 GCCCCACGTTGGGC 867736
>seq30465
Length=1884344
Score = 93.3 bits (102), Expect = 9e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895
||||||||| ||||||||||| |||||||| || || ||||| | ||||| |
Sbjct 1772069 CTGCACTCTGATCCTGACAGAAGGAGACTCGGCCAAAACTCTGGCCGTGTCGGGTCTAGG 1772010
Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955
|||||||| ||||| | |||||| ||||||| || |||||||| ||||||| || ||
Sbjct 1772009 TGTGGTGGGACGTGACCGCTATGGTGTCTTCCCTCTGCGTGGTAAAATGCTCAATGTTCG 1771950
Query 217956 CGATGCCTC 217964
|| || ||
Sbjct 1771949 AGAGGCATC 1771941
>seq9401
Length=1939181
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 890753 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 890694
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 890693 GCCCCACGTTGGGC 890680
>seq2157
Length=354873
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 120719 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 120660
Query 142563 CCCCACATCGGGCAGAAGT 142581
|||||| | |||| ||||
Sbjct 120659 CCCCACGTTGGGCGAAAGT 120641
>seq35465
Length=3269434
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1947528 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1947587
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1947588 CCCCACGTTGGGC 1947600
>seq32526
Length=710344
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 484077 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 484136
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 484137 CCCCACGTTGGGC 484149
>seq2533
Length=2640371
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1173337 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1173278
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1173277 CCCCACGTTGGGC 1173265
>seq31878
Length=102391
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 8802 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8861
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 8862 CCCACGTTGGGC 8873
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564
||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 10228 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCC 10287
Query 142565 CCACATCGGGC 142575
|||| | ||||
Sbjct 10288 CCACGTTGGGC 10298
>seq29212
Length=315838
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 84568 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 84509
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 84508 CCCACGTTGGGC 84497
>seq26626
Length=1949
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1408 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1467
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 1468 CCCACGTTGGGC 1479
>seq24713
Length=1250
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 650 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 591
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 590 CCCACGTTGGGC 579
>seq12811
Length=584
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||
Sbjct 461 GCCCGGTTAGCTCAGTCTGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 402
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 401 CCCACGTTGGGC 390
>seq10122
Length=217154
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 8267 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 8208
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 8207 CCCACGTTGGGC 8196
>seq5824
Length=34452
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 31044 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 30985
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 30984 CCCACGTTGGGC 30973
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 32362 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 32303
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 32302 CCCACGTTGGGC 32291
>seq2301
Length=1851
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 567 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 508
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 507 CCCACGTTGGGC 496
>seq34907
Length=1693808
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 1428688 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 1428629
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 1428628 TCCCGGCAGAGA 1428617
>seq14531
Length=3189662
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 1557718 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 1557659
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 1557658 TCCCGGCAGAGA 1557647
>seq20549
Length=1606687
Score = 84.2 bits (92), Expect = 4e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564
||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||
Sbjct 551528 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTCGGTTCGAGCC 551587
Query 142565 CCACATCGGGC 142575
|||| | ||||
Sbjct 551588 CCACGTTGGGC 551598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1025674779659493
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |