Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq32410 82.4 5e-11
>seq32410
Length=743546
Score = 82.4 bits (90), Expect = 5e-11
Identities = 151/220 (69%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563
||||| |||| |||||| ||| ||||| || || || || || | ||| ||| |
Sbjct 172495 ACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCC 172436
Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623
||| |||| ||||| ||| |||| || || | |||||| || | ||| | |||||||||
Sbjct 172435 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTT 172376
Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT---TCCACGTCCAAAGT 39680
||| || || || | || | | ||||| ||||| || || || | ||
Sbjct 172375 GTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGT---CGCTTGGCTCAACCTCAAGGGT 172319
Query 39681 AATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || || || || || || || |||||||||||||||
Sbjct 172318 GATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 172279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346674562604909
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |