Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq32410 82.4 5e-11 >seq32410 Length=743546 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/220 (69%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 39504 ACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC 39563 ||||| |||| |||||| ||| ||||| || || || || || | ||| ||| | Sbjct 172495 ACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCC 172436 Query 39564 ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTT 39623 ||| |||| ||||| ||| |||| || || | |||||| || | ||| | ||||||||| Sbjct 172435 ATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTT 172376 Query 39624 GTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTT---TCCACGTCCAAAGT 39680 ||| || || || | || | | ||||| ||||| || || || | || Sbjct 172375 GTCCTGGATCTTAGCCTTGACGTTCTCAATTGTGT---CGCTTGGCTCAACCTCAAGGGT 172319 Query 39681 AATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 || || || || || || || || ||||||||||||||| Sbjct 172318 GATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 172279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346674562604909