Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq6588 165 7e-35 seq27319 149 5e-30 seq42075 127 2e-23 seq12469 113 4e-19 seq14084 111 1e-18 seq19001 107 2e-17 seq16473 107 2e-17 seq29075 105 5e-17 seq21577 105 5e-17 seq10972 104 2e-16 seq86681 100 2e-15 seq18695 100 2e-15 seq13023 100 2e-15 >seq6588 Length=408601 Score = 165 bits (182), Expect = 7e-35 Identities = 404/608 (66%), Gaps = 7/608 (1%) Strand=Plus/Minus Query 549969 AAGATATAATGT-CAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGT 550027 ||||| | || | |||| ||| ||||| || || || | || ||||| || ||| Sbjct 197684 AAGATGTCATCTGCAAAAGGAGTTGCTATTGGAATTGACCTGGGCACCACCTACTCCTGT 197625 Query 550028 GTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACT 550087 || || || | || |||| ||||| || || || |||||||| || || |||||||| Sbjct 197624 GTGGGGGTGTTTCAGCATGGAAAAGTGGAGATCATCGCCAATGACCAGGGGAACAGAACA 197565 Query 550088 ACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATAT 550147 || || |||||| | || || || ||||| | |||| |||||||| ||| | Sbjct 197564 ACACCCAGCTATGTTGCCTTTACAGACACTGAGAGGCTCATTGGAGATGCAGCTAAAAAC 197505 Query 550148 CAAG---CCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGA 550204 || | ||| || || || | ||| || | ||||||||||| | | ||||| ||| Sbjct 197504 CAGGTGGCCA-TG--AACCCCAACAACACCGTGTTTGATGCTAAGAGGCTGATTGGCAGA 197448 Query 550205 AGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAAT 550264 | ||| |||| | ||| ||| | || |||||||| ||| | |||| | | || | | Sbjct 197447 AAGTTTGATGACCCAGTTGTGCAGTCTGACATGAAGCACTGGTCCTTCCGAGTCGTCAGT 197388 Query 550265 GTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCA 550324 | | | ||| ||| | | | | | | ||||| ||| ||||| || Sbjct 197387 GATGGAGTAAAGCCTAAGGTACAGGTTGAGTACAAAGGAGAGACCAAATCATTTTACCCC 197328 Query 550325 GAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGT 550384 || |||| || || ||||| | |||| ||||| | | || |||| | || Sbjct 197327 GAGGAAATCTCTTCCATGGTCCTTGTGAAGATGAAGGAGATTGCAGAGGCTTACCTGGGA 197268 Query 550385 CAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAA 550444 || | || ||| |||| || || || || || || |||||||| || || ||| | ||| Sbjct 197267 CATAAGGTGACGAATGCTGTTATTACAGTTCCTGCGTATTTTAACGATTCCCAAAGGCAA 197208 Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || |||||||| ||||| || |||||||| ||||| || | || ||||| || || Sbjct 197207 GCCACTAAAGACACTGGAGTAATCGCTGGACTGAATGTCCTCAGAATCATCAACGAGCCC 197148 Query 550505 ACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTC 550564 || ||||| || |||| ||||| ||||| ||| || | | ||| | || || || Sbjct 197147 ACAGCTGCAGCCATTGCCTATGGCCTTGACAAAGGCAAAGCTTCAGAGCGCAACGTCCTG 197088 Query 550565 ATCTTTGA 550572 |||||||| Sbjct 197087 ATCTTTGA 197080 Score = 123 bits (136), Expect = 2e-22 Identities = 517/807 (64%), Gaps = 17/807 (2%) Strand=Plus/Minus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTT 551846 |||||| ||||||| ||||| || || ||||| || | |||| |||| | |||| Sbjct 197007 TGGAGACACTCATCTGGGTGGAGAGGACTTTGACAACCGCATGGTGAATCAC--TTTGTT 196950 Query 551847 GAAGATTTTAAACGAAAAAACAA--AGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 ||||| || || ||||| |||| || ||| || | | || || || | Sbjct 196949 GAAGAATTCAAGAGAAAACACAAGAAGGACATCAGTCAGAACAAG--AAGGCCCTGAGGA 196892 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | || | || || || || ||||||| | | || || || | |||| ||| | Sbjct 196891 GGCTGCGTACAGCATGTGAGCGAGCCAAGAGGACACTCTCGTCCAGCTCTCAGGCCAGCA 196832 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 |||| | || ||| | | ||||| ||||| | | ||| | || | || || | Sbjct 196831 TTGAGATTGACTCACTGTACGAGGGCATTGACTTCTACACGTCCATCACCAGAGCGCGCT 196772 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAA 552084 || |||| | || || || ||||| ||| |||| |||| || || ||| ||| | | Sbjct 196771 TTAAAGAGCTGTGCTCAGACCTCTTCAGAGGAACACTTGATCCTGTGGAAAAAGCCCTGA 196712 Query 552085 GAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAA 552144 |||| | ||||| || || || | | ||||| |||||| | ||||||||||| |||| Sbjct 196711 GAGACGCCAAGATGGAAAAGTCTCAGATTCATGACATTGTGTTGGTTGGTGGATCAACAA 196652 Query 552145 GAATTCCTAAAATTCGCGAA--ATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 ||||||| || || ||| | | || || ||||||||| ||| || | || | Sbjct 196651 GAATTCC-AAGGATCCAGAAGCTTCTGCAG-GATTTTTTCAATGGCAAAGAACTTAACAA 196594 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 || | |||||||||||||| || | |||||||| || | ||||| || || || Sbjct 196593 GAGCATCAATCCAGATGAGGCAGTGACTTATGGTGCTGCGGTCCAAGCCGCCATCCTCAT 196534 Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 ||| | || || || | ||| | | | ||| | |||||| | || ||||| || Sbjct 196533 GGGAGACACATCTGGAAGTGTCCAAGACTTGTTGCTTCTGGATGTTGCACCACTATCCCT 196474 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 || | || || | || || | |||| || ||| | | || || || || || Sbjct 196473 GGGCATCGAGACGGCAGGCGGAGTCATGATGCCACTGATCAAACGCAACACCACCATCCC 196414 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTAC---GTAT--TCAGATAATCAAACTGCTGTTACA 552437 ||| | | | || | || |||| ||||| | || | | ||| Sbjct 196413 CACCAAACAGACCCAGACCTTCACCACCCAGTATACTCAGACAGCCAGCCCGGTGTCCTG 196354 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || || | | ||| ||||| || | | || ||||| || || | || |||| ||| Sbjct 196353 ATCCAGGTCTATGAGGGAGAGAGGGCAATGACAAAAGACAACAACCTGCTGGGTAAATTT 196294 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | | ||| || || ||||| || | |||||| ||||| |||||||| || || || Sbjct 196293 GAGCTGACAGGAATCCCACCTGCACCACTTGGAGTCCCGCAGATTGAAGTGACCTTTGAC 196234 Query 552558 ATCGATGCCAATGGAATTTTGAATGTG 552584 ||||||| ||| ||||| | |||||| Sbjct 196233 ATCGATGTCAACGGAATCCTAAATGTG 196207 >seq27319 Length=1934004 Score = 149 bits (164), Expect = 5e-30 Identities = 358/542 (66%), Gaps = 0/542 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | |||||||| || |||||| || || | || |||| || || Sbjct 1625110 ATTGGCATTGATCTGGGAACCACTTACTCTTGTGTGGGGGTGTTCCAGCATGGCAAGGTG 1625169 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||||| ||||||||||| |||||||| |||||| || ||| | ||||| || Sbjct 1625170 GAAATCATTGCTAATGATCAAGGAAACAGAACCACTCCAAGCTACGTTGCCTTCACAGAC 1625229 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || ||| | | || |||||||| || | || | | | || || | ||| || Sbjct 1625230 ACAGAAAGACTCATCGGAGATGCAGCCAAGAACCAGGTCGCCATGAACCCCAACAACACA 1625289 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || |||||||| ||||| | ||||| |||| ||||||||| | || ||| | || Sbjct 1625290 ATATTTGATGCCAAACGACTGATTGGTAGAAAGTTTAATGATCCAGTGGTCCAGTCTGAC 1625349 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACT 550294 ||||||| |||||| ||| | | | | ||| ||||| | || ||| | Sbjct 1625350 ATGAAGCTTTGGCCCTTCAAGGTCATCTGCGAAAATGGCAAACCAAAAGTTCAAGTTGAG 1625409 Query 550295 CATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 | ||||| || ||| | || || | || ||||| ||||| || | ||| Sbjct 1625410 TACAAAGGAGAGACCAAGACATTCTACCCTGAGGAGATCTCATCCATGGTCCTAGTCAAA 1625469 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTA 550414 |||| | | | ||| || | | ||||| ||| | | || || || || || Sbjct 1625470 ATGAGAGAGATCGCCGAGGCCTACCTGGGTCAGAGAGTCAATAACGCCGTCATCACGGTC 1625529 Query 550415 CCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGA 550474 |||||||| ||||| || || || | ||||| || ||||| || || | || ||| Sbjct 1625530 CCAGCATACTTTAACGATTCTCAGAGGCAAGCGACCAAAGACGCGGGGGTGGTCGCCGGA 1625589 Query 550475 CTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT 550534 | || ||||| || ||||||||||| || || || ||||| | || || || || || Sbjct 1625590 TTGAACGTTCTGCGAATTATCAATGAGCCCACAGCGGCTGCCATCGCCTACGGGCTGGAC 1625649 Query 550535 AA 550536 || Sbjct 1625650 AA 1625651 >seq42075 Length=2953619 Score = 127 bits (140), Expect = 2e-23 Identities = 357/546 (65%), Gaps = 9/546 (2%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || || || ||| | || ||||| || ||||| || || | || |||| ||||| Sbjct 420298 ATTGGCATTGATCTGGGTACCACTTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTG 420357 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||||| ||||||||||| |||||||| |||||| || ||| | ||||| || Sbjct 420358 GAAATCATTGCTAATGATCAAGGGAACAGAACCACTCCAAGCTACGTTGCCTTCACAGAC 420417 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 || ||| | | || || || || || | || | | | || || | ||| || Sbjct 420418 ACAGAAAGACTCATCGGAGACGCTGCCAAGAACCAGGTCGCCATGAACCCCAACAACACA 420477 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 || |||||||| ||||| | |||||||| | ||||||||| | || ||| | || Sbjct 420478 ATATTTGATGCCAAACGACTGATTGGAAGGAAGTTTAATGATCCAGTGGTCCAGTCTGAC 420537 Query 550235 ATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG----C 550290 ||||||| |||||| ||| | | | | || ||||| | || ||| Sbjct 420538 ATGAAGCTTTGGCCCTTCAAGGTCATCTCCGAAGACGGCAAACCAAAAGTTCAAGTTGAG 420597 Query 550291 TACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAAT 550350 ||| | ||| || | || ||| | || || | || ||||| ||||| || | Sbjct 420598 TACAAAGGAAAGACC----AAGACATTCTACCCTGAGGAGATCTCATCCATGGTCCTAGT 420653 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||||||| | | | ||| || | | ||||| || | | || || ||||| Sbjct 420654 CAAAATGAGAGAGATCGCCGAGGCCTACCTGGGTCAGAGGGTCAATAACGCCGTCATAAC 420713 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 || ||||| || ||||| || || || | ||||| || ||||| || || | || || Sbjct 420714 GGTCCCAGCGTACTTTAACGATTCTCAGAGGCAAGCGACCAAAGACGCGGGGTG-ATCGC 420772 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||| | || || || | ||||||||||| || || || ||||| | || ||||| || Sbjct 420773 CGGATTGAACGTGCTGCAAATTATCAATGAGCCCACAGCGGCTGCCATCGCCTATGGGCT 420832 Query 550531 TGATAA 550536 || || Sbjct 420833 GGACAA 420838 Score = 114 bits (126), Expect = 1e-19 Identities = 433/677 (64%), Gaps = 12/677 (2%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || || ||||||||||| ||| | | ||||||||| | ||||| ||| || || | Sbjct 421018 ACGGCCTGCGAAAGAGCTAAAAGGACCCTTTCATCTAGCACTCAGGCCAGCATCGAGATC 421077 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| | ||||| || ||||||| |||| | || | ||||| |||||||| Sbjct 421078 GATTCCCTGTTTGAAGGCATTGATTTCTATACTTCCATCACAAGGGCTCGCTTTGAAGAG 421137 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 || |||| ||||| ||| || | |||||||| || | | ||| |||||| | Sbjct 421138 CTTAACGCTGAGCTCTTCAGAGGCACGCTGGAACCAGTCGAGAAGGCTTTGAGAGATGCT 421197 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 || || || || ||| | | | || ||||| || ||||| || || || || || || Sbjct 421198 AAAATGGACAAGTCCCAGATCAACGATATTGTTCTGGTTGGCGGCTCCACCAGGATCCCC 421257 Query 552153 AAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 || || | | | || ||| || |||| ||| | | | || | || | | Sbjct 421258 AAGATCCAGAAGCTTTTGCAAG--ATTTCTTCAGTGGCAGGGATCTCAACAAGAGCATCA 421315 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAA 552270 | ||||||||||| || | ||||| || || | || || || || || || | | Sbjct 421316 ACCCAGATGAGGCGGTGTCATATGGAGCAGCGGTGCAGGCTGCCATCCTGATGGGCGACA 421375 Query 552271 CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAG 552330 | ||||| | || | | | ||| | || || ||||| | || | ||| | | Sbjct 421376 CCTCGGAAAACGTTCAGGACTTGTTGCTTCTGGACGTGGCTCCTTTGTCCTTGGGTATCG 421435 Query 552331 AAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAA 552390 | || || ||||| | |||||| ||| ||| | | || || || || || || Sbjct 421436 AGACCGTAGGAGGAGTCATGACTGCTCTCATCAAACGCAACACCACCATCCC----CAAC 421491 Query 552391 AATCTCGTG----TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || | || | || || || ||||| ||||| || | | || || || | Sbjct 421492 AAGCAGATGCAGATCTTCTCCACATATTCTGATAACCAGCCAGGCGTCCTGATCCAGGTG 421551 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 |||||||| || || | || |||||||| ||| || || | ||| | | Sbjct 421552 TTTGAAGGTGAGAGGGCCATGACCAAAGATAACAATTTGCTCGGCAAGTTTGAGCTCACT 421611 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||| || || || || || || ||||| |||||||| || || || || ||||||||| Sbjct 421612 GGTATCCCACCAGCGCCACGAGGCGTACCCCAAATTGAGGTGACCTTTGACATCGATGCC 421671 Query 552567 AATGGAATTTTGAATGT 552583 ||||| || |||| || Sbjct 421672 AATGGCATACTGAACGT 421688 >seq12469 Length=2929400 Score = 113 bits (124), Expect = 4e-19 Identities = 132/176 (75%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 549970 AGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGT 550029 ||| | |||||| || | |||| | ||||| ||| | || ||||| || ||||| Sbjct 1392460 AGAGACAATGTCCAAGGGACCAGCTGTTGGTATTGATCTCGGGACCACCTACTCCTGTGT 1392401 Query 550030 TGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTAC 550089 ||||||| ||| |||| ||||||||||| ||||| ||||| ||||| ||||| || || Sbjct 1392400 AGGTGTTTTCCAACATGGAAAAGTTGAAATCATTGCTAATGACCAAGGAAACAGGACCAC 1392341 Query 550090 TCCATCTTATGTTTCTTTCACGGAAACTGA-ACATTTAGTTGGTGATGCAGCAAAA 550144 |||| ||||| ||||||| || | ||| | ||| | |||| ||||| |||||| Sbjct 1392340 TCCAAGCTATGTAGCTTTCACAGATAGTGAGAGATTGA-TTGGAGATGCTGCAAAA 1392286 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || || || || || || || || || ||||||||| || Sbjct 1391322 ACAGTGCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACCAAGGATGCTGGAACCATC 1391263 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | |||||||| ||||| ||||||||||| ||||||||||| |||| || || Sbjct 1391262 TCTGGATTGAATGTTCTGCGTATAATCAATGAACCAACTGCTGCTGCTATTGCTTACGGT 1391203 Query 550529 CTTGATAAA 550537 || || ||| Sbjct 1391202 CTGGACAAA 1391194 >seq14084 Length=697705 Score = 111 bits (122), Expect = 1e-18 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || || || || || |||||||| || || || || || || |||| Sbjct 5358 ATGCTGTTATTACGGTTCCTGCTTACTTCAATGACTCTCAGCGCCAGGCCACAAAGGATG 5417 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| ||| |||| || |||||||| || ||||||||||| || |||||||||||| Sbjct 5418 CTGGGACTATCTCTGGCCTCAATGTTCTACGAATTATCAATGAGCCGACTGCTGCTGCAA 5477 Query 550518 TTGCATATGGACTTGATAA 550536 |||| |||||||| || || Sbjct 5478 TTGCCTATGGACTGGACAA 5496 Score = 89.7 bits (98), Expect = 4e-12 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 549977 ATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTT 550036 |||||||| | ||| | || || ||| | || ||||| || || || || || Sbjct 3336 ATGTCAAAGGGACCAGCAGTTGGCATTGATCTGGGGACCACCTACTCCTGCGTGGGGGTG 3395 Query 550037 TGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCT 550096 | || |||| ||||||||||| ||||||||||| || |||||||| || |||||| | Sbjct 3396 TTTCAGCATGGCAAAGTTGAAATCATTGCCAATGACCAGGGTAACAGGACCACTCCAAGT 3455 Query 550097 TATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCA 550154 ||||| | ||||| || || || | |||| ||||| || ||| |||||| || Sbjct 3456 TATGTAGCATTCACAGACACAGAGAGGCTGATTGGAGATGCTGCTAAAAATCAAGTAGCA 3515 Query 550155 CTGGTAATCCTACCAATACTATTTTTG 550181 || || || |||||||| | |||| Sbjct 3516 ATG--AACCCCACCAATACAGTCTTTG 3540 >seq19001 Length=576734 Score = 107 bits (118), Expect = 2e-17 Identities = 188/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 549988 AGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGG 550047 ||| ||||| || || || | || ||||| || ||||| || || | || |||| Sbjct 421062 AGTTGCTATTGGGATTGACCTGGGCACCACCTACTCCTGTGTGGGGGTGTTTCAGCATGG 421121 Query 550048 TAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTT 550107 ||||| || || || |||||||| || || |||||||| || || |||||| | || Sbjct 421122 AAAAGTGGAGATCATCGCCAATGACCAGGGAAACAGAACAACACCCAGCTATGTTGCCTT 421181 Query 550108 CACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCC 550164 ||| || ||||| | |||| |||||||| ||| | || | ||| || || || Sbjct 421182 CACAGACACTGAGAGGCTCATTGGAGATGCAGCTAAAAACCAGGTGGCCA-TG--AACCC 421238 Query 550165 TACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGT 550224 | ||| || | ||||||||||| | | ||||| |||| ||| |||| | ||| Sbjct 421239 CAACAACACCGTGTTTGATGCTAAGAGGCTGATTGGCAGAAAGTTTGATGACCCAGTTGT 421298 Query 550225 TCAGGCAGATATGAAGCATTGGCCTTTCCAA 550255 ||| | || |||||||| ||| |||||||| Sbjct 421299 GCAGTCTGACATGAAGCACTGGTCTTTCCAA 421329 >seq16473 Length=1325276 Score = 107 bits (118), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 549960 TTTTGACATA-AGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACA 550018 |||| | ||| ||| | |||||| || | |||| | ||||| ||| | || ||||| Sbjct 1294591 TTTTTATATATAGACACAATGTCCAAGGGACCAGCTGTTGGTATTGATCTCGGGACCACC 1294532 Query 550019 TATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGT 550078 || ||||| ||||||| ||| |||| ||||||||||| ||||| ||||| ||||| Sbjct 1294531 TACTCCTGTGTAGGTGTTTTCCAACATGGAAAAGTTGAAATCATTGCTAATGACCAAGGA 1294472 Query 550079 AACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCA 550138 ||| | || |||||| ||||| ||||||| || |||| || |||| ||||| Sbjct 1294471 AACCGGACCACTCCAAGCTATGTAGCTTTCACAGATTCTGAGAGGTTGATTGGAGATGCC 1294412 Query 550139 GCAAAA 550144 |||||| Sbjct 1294411 GCAAAA 1294406 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || || || || || || || || || ||||||||| || Sbjct 1293665 ACAGTGCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACCAAGGATGCTGGAACCATC 1293606 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 |||| | |||||||| ||||| ||||||||||| ||||||||||| |||| ||||| Sbjct 1293605 TCTGGCTTGAATGTTCTGCGTATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGT 1293546 Query 550529 CTTGATAAA 550537 || || ||| Sbjct 1293545 CTGGACAAA 1293537 >seq29075 Length=1308942 Score = 105 bits (116), Expect = 5e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 550394 ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAA 550453 ||| |||| || | || ||||| || || || |||||||| || || || || ||||| Sbjct 8235 ACGAATGCTGTTGTTACAGTACCTGCTTACTTCAATGACTCTCAGCGCCAGGCCACTAAG 8294 Query 550454 GATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCT 550513 |||||||| ||| |||| || |||||||| || || |||||||| || ||||||||| Sbjct 8295 GATGCTGGGACTATCTCTGGCCTAAATGTTCTACGAATCATCAATGAGCCGACTGCTGCT 8354 Query 550514 GCACTTGCATATGGACTTGATAA 550536 || |||| ||||| || || || Sbjct 8355 GCCATTGCCTATGGTCTGGACAA 8377 Score = 93.3 bits (102), Expect = 3e-13 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 549970 AGATATAATGTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGT 550029 ||| || |||||||| | |||| | || || ||| | || ||||| || || || Sbjct 7195 AGAAATCATGTCAAAGGGACTAGCAGTTGGCATTGATCTGGGCACCACCTACTCCTGCGT 7254 Query 550030 TGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTAC 550089 || || | || |||| ||||||||||| ||||||||||| || |||||||| || || Sbjct 7255 GGGGGTCTTTCAGCATGGCAAAGTTGAAATCATTGCCAATGACCAGGGTAACAGGACCAC 7314 Query 550090 TCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA 550149 ||| |||||| | ||||| || || || | |||| ||||| || ||| |||| Sbjct 7315 ACCAAGTTATGTAGCATTCACAGACACAGAGAGGCTGATTGGAGATGCTGCCAAAAATCA 7374 Query 550150 AG--CCACTGGTAATCCTACCAATACTATTTTTG 550181 || || || || || |||||||| | |||| Sbjct 7375 AGTAGCAATG--AACCCCACCAATACAGTGTTTG 7406 >seq21577 Length=2421781 Score = 105 bits (116), Expect = 5e-17 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 || |||||||| || || || ||||| ||| | ||| || ||||| |||| |||| Sbjct 24806 CTCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGG--ATGTTGTAGTCAGACAGAG 24863 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | | |||||| || || || |||||||| || || | ||||| ||||||||||| | Sbjct 24864 TGCGTCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGC 24923 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGA 563431 |||| || ||||| ||||| ||| || |||||| || || || | | |||| Sbjct 24924 CTTCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGA 24983 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || | || || ||||| || || || ||||| || |||||| Sbjct 24984 GGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 25027 Score = 96.9 bits (106), Expect = 3e-14 Identities = 159/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 || ||||| || |||||||| || || ||| | | ||| || ||||| || | |||| Sbjct 24578 CTCAGACGCAGGACAAGATGGAGTGTGGACTCTTTCTGG--ATGTTGTAGTCGGACAGAG 24635 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | | |||||| | ||||| ||||| || || | | ||||| ||||||||||| | Sbjct 24636 TGCGTCCATCTTCCAACTGTTTGCCGGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGC 24695 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCG 563430 |||| |||||||| || || || || |||||| || ||| | || | || || Sbjct 24696 CTTCCTTATCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACT-TGGTTCCACCTCA 24754 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| | ||||||||||| | || || || || || |||||| Sbjct 24755 AGAGTGATGGTTTTACCAGTCAAGGTCTTCACAAAGATCTGCATA 24799 Score = 93.3 bits (102), Expect = 3e-13 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| || |||||||| ||||| ||| || || |||||||||| || || Sbjct 25034 CTCAGACGCAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTG 25093 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| | || || || || || || || | |||||||||||||| || ||| Sbjct 25094 CGTCCATCTTCCAACTGCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGGATGCCT 25153 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || ||||| ||||| ||| || |||||| || || || | | ||||| Sbjct 25154 TCCTTGTCTTGGATTTTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGG 25213 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | || || ||||| || || || || || || ||||| Sbjct 25214 GTGATGGTCTTGCCAGTCAGCGTCTTCACAAAGATCTGCAT 25254 Score = 86.0 bits (94), Expect = 5e-11 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || |||||||| || || || ||||| ||| || || |||||||||| || || Sbjct 24122 CTCAGACGGAGCACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTG 24181 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || || || || || || || || || | ||||| ||||||||||| ||| Sbjct 24182 CGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCT 24241 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || ||||| ||||| ||| || |||||| || || || | | || || Sbjct 24242 TCCTTGTCTTGGATTTTAGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGG 24301 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || | || || ||||| || || || || || || |||||| Sbjct 24302 GTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATA 24343 >seq10972 Length=1890035 Score = 104 bits (114), Expect = 2e-16 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| || || || || || || ||||||||||| || || ||||| || || || | Sbjct 1675817 ATGCAGTCATTACAGTGCCTGCTTACTTTAATGACTCTCAGCGCCAAGCCACCAAGGACG 1675876 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| |||||||| ||||| || || || |||||||| || || || || ||||| Sbjct 1675877 CTGGAACCATTGCTGGCCTTAACGTCCTCCGCATTATCAACGAGCCAACGGCCGCTGCCA 1675936 Query 550518 TTGCATATGGACTTGATAAA 550537 | ||||||||| | || ||| Sbjct 1675937 TCGCATATGGATTGGACAAA 1675956 Score = 102 bits (112), Expect = 7e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 552449 TGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGG 552508 ||| ||||| ||| | | || || ||||| || | ||||| | ||| | || || Sbjct 1677465 TGAGGGAGAGAGAGCAATGACGAAGGATAACAACCTTCTTGGCAAATTTGAGTTGATTGG 1677524 Query 552509 TATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAA 552568 || ||||||||||||||||| || || |||||||||||||| ||||| || |||||||| Sbjct 1677525 CATCCCTCCTGCTCCTCGTGGTGTGCCACAAATTGAAGTTACATTCGACATTGATGCCAA 1677584 Query 552569 TGGAATTTTGAATGTG 552584 ||| ||| | |||||| Sbjct 1677585 TGGCATTCTCAATGTG 1677600 >seq86681 Length=251 Score = 100 bits (110), Expect = 2e-15 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTA 552083 |||||||| || || || || ||||| ||| |||| |||| || || ||| ||| | Sbjct 247 TTTGAAGAGATGTGCTCAGACCTCTTCAGAGGAACACTTGATCCTGTGGAAAAAGCCCTG 188 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 ||||| | ||||| || || || | | ||||| |||||| | ||||||||||| || Sbjct 187 AGAGACGCCAAGATGGACAAGTCTCAGATTCATGACATTGTGTTGGTTGGTGGATCAACG 128 Query 552144 AGAATTCCTAAAATTCGCGAA--ATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 |||||||| || || ||| | | || || ||||| || | | | ||||| Sbjct 127 AGAATTCC-AAGGATCCAGAAGCTTCTGCAG-GATTTCTTCAACGGCAGAGACTTAAACA 70 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 | || | |||||||||||||| || || |||||||| || | ||||| || || || Sbjct 69 AGAGCATCAATCCAGATGAGGCAGTGGCTTATGGTGCTGCGGTCCAAGCCGCCATCCT 12 >seq18695 Length=664 Score = 100 bits (110), Expect = 2e-15 Identities = 167/238 (70%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTA 552083 |||||||| || || || || ||||| ||| |||| |||| || || ||| ||| | Sbjct 375 TTTGAAGAGATGTGCTCAGACCTCTTCAGAGGAACACTTGAGCCTGTGGAAAAAGCCCTG 316 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 ||||| | ||||| || || || | | ||||| |||||| | ||||||||||| ||| Sbjct 315 AGAGACGCCAAGATGGACAAGTCTCAGATTCATGACATTGTGTTGGTTGGTGGATCAACA 256 Query 552144 AGAATTCCTAAAATTCGCGAA--ATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 |||||||| ||| || ||| | | || || ||||| || | | | || || Sbjct 255 AGAATTCC-AAAGATCCAGAAGCTTCTGCAG-GATTTCTTCAACGGCAGAGACTTGAACA 198 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCT 552259 | || | || ||||| ||||| || || |||||||| || ||||||| || || || Sbjct 197 AGAGCATCAACCCAGACGAGGCAGTGGCTTATGGTGCTGCGGTTCAAGCCGCCATCCT 140 >seq13023 Length=224865 Score = 100 bits (110), Expect = 2e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 ||||||| | || || || || || ||||||||||| || || ||||| || || || | Sbjct 126272 ATGCAGTCGTTACAGTGCCTGCTTAATTTAATGACTCTCAGCGCCAAGCCACCAAGGACG 126213 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| |||||||| ||||| || || | ||||||||||| || || || ||||| Sbjct 126212 CTGGAACCATTGCTGGCCTTAACGTCCTCTGCATTATCAATGAGCCAACAGCGGCTGCCA 126153 Query 550518 TTGCATATGGACTTGATAAA 550537 | ||||||||| | || ||| Sbjct 126152 TCGCATATGGATTGGACAAA 126133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4020613791339770