Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq36865 104 3e-17
seq3015 104 3e-17
>seq36865
Length=2971667
Score = 104 bits (114), Expect = 3e-17
Identities = 100/127 (79%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 37195 AACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttt 37254
||||| ||||||| || || | |||||| || |||| | ||| ||||| | |||||||
Sbjct 1669567 AACCT-CATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTT 1669509
Query 37255 ttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314
| || | ||| | || || ||||| |||||||| ||||| || ||||| ||||||||||
Sbjct 1669508 TCTTCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAA 1669449
Query 37315 ATGCTAC 37321
|||||||
Sbjct 1669448 ATGCTAC 1669442
>seq3015
Length=1951583
Score = 104 bits (114), Expect = 3e-17
Identities = 100/127 (79%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 37195 AACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttt 37254
||||| ||||||| || || | |||||| || |||| | ||| ||||| | |||||||
Sbjct 197197 AACCT-CATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTT 197255
Query 37255 ttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314
| || | ||| | || || ||||| |||||||| ||||| || ||||| ||||||||||
Sbjct 197256 TCTTCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAA 197315
Query 37315 ATGCTAC 37321
|||||||
Sbjct 197316 ATGCTAC 197322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 591101269674920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |