Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq3398 98.7 1e-15
>seq3398
Length=266309
Score = 98.7 bits (108), Expect = 1e-15
Identities = 220/330 (67%), Gaps = 3/330 (1%)
Strand=Plus/Plus
Query 160062 TCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGCGAACAGATGG 160121
|||| ||||| || || | |||| || ||| ||| || || ||||| || ||||||
Sbjct 25862 TCCATACATTTGATTGCTACATCGTCTACTTCTGGGTCAAACTTGTTTGCCAAAAGATGG 25921
Query 160122 TGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGACGGAACGTATG 160181
|| | ||| | ||||| | || ||| || | || | || || || | | | ||
Sbjct 25922 TGT---TGCTGCACAATCCATTTCAAGTCCCCAGCTCCATAGACACACACTGCCCATCTG 25978
Query 160182 TGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTGC 160241
|||| || ||| || ||||| || | || ||| || || ||||| |||| |
Sbjct 25979 TGCATCCCAGTGCGTGGTGGGTAGGGATCCCCATTCTTCAGTTCTCCTTCAAAGTAGCTC 26038
Query 160242 CACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGGA 160301
|||||||| || | || || | | |||||| || | ||| ||| | | |||
Sbjct 26039 CACTTCACCAAACGAGCAATTGAATTCATGTCCGATTGCTGGTACTTGATGTTTGGAGGA 26098
Query 160302 ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCTG 160361
|| || ||||| ||||| ||||||| || ||||||| ||| || || || |||
Sbjct 26099 TTGGATCCTGGAACTGAAGGCATTCGCTGTAATGTAGCCCACATGTGCTCATCTGGACTG 26158
Query 160362 TACGTGTCCTTAGACCATTCCATGAACTCT 160391
|||||||| || |||||||||||| |||
Sbjct 26159 TACGTGTCTTTCTCCCATTCCATGAAATCT 26188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576034652403480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |