Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq147642 95.1 1e-14
seq15552 95.1 1e-14
seq19765 82.4 9e-11
>seq147642
Length=763
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955
|| ||||| ||||| || ||||| || ||||| ||||||||||| || ||| |||||
Sbjct 750 TCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGCAACCGCAAGAGC 691
Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015
||||| |||| |||| || ||||| || || | ||||| || ||| ||||||||
Sbjct 690 AACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAGATTGTAGAGTAC 631
Query 76016 ACAGATAAGGATGAG 76030
|| ||||||||||
Sbjct 630 ACCAGTAAGGATGAG 616
>seq15552
Length=1137653
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955
|| ||||| ||||| || ||||| || ||||||||||||||||| || ||| || ||
Sbjct 1133711 TCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGCAACCGCAAAAGC 1133770
Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015
||||| |||| |||| || || || || || | ||||| |||||| ||||||||
Sbjct 1133771 AACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTAGAGTAC 1133830
Query 76016 ACAGATAAGGATGAG 76030
|| ||||||||||
Sbjct 1133831 ACCAGTAAGGATGAG 1133845
>seq19765
Length=1114994
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147
|| ||||| |||||| || |||||||| | ||||| || ||| |||||| |||||
Sbjct 414357 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTTTGGGTCTTT-TGCTTCTATTTTCTGGTT 414415
Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207
|||||| | || |||||||| || || |||||| ||||||||||| | |||||||
Sbjct 414416 AAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTTATCAGCAGAGATGA 414475
Query 65208 GG 65209
||
Sbjct 414476 GG 414477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595345342238240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |