Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq147642 95.1 1e-14 seq15552 95.1 1e-14 seq19765 82.4 9e-11 >seq147642 Length=763 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||| ||||||||||| || ||| ||||| Sbjct 750 TCTCAGACAGAGACCGGCACACCCTACATGCTCTACAAGGATGCCTGCAACCGCAAGAGC 691 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || ||||| || || | ||||| || ||| |||||||| Sbjct 690 AACCAGCAGAACCTGGGCACCATCAAATGCAGTAACTTGTGCACAGAGATTGTAGAGTAC 631 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 630 ACCAGTAAGGATGAG 616 >seq15552 Length=1137653 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| ||||| || ||||| || ||||||||||||||||| || ||| || || Sbjct 1133711 TCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAGGATGCCTGCAACCGCAAAAGC 1133770 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| |||| || || || || || | ||||| |||||| |||||||| Sbjct 1133771 AACCAGCAGAACCTGGGCACCATTAAATGCAGTAACTTGTGCACAGAAATTGTAGAGTAC 1133830 Query 76016 ACAGATAAGGATGAG 76030 || |||||||||| Sbjct 1133831 ACCAGTAAGGATGAG 1133845 >seq19765 Length=1114994 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTT 65147 || ||||| |||||| || |||||||| | ||||| || ||| |||||| ||||| Sbjct 414357 GCTTTTGCTGCTGTGGAAGGAATCTTCTTTTTTGGGTCTTT-TGCTTCTATTTTCTGGTT 414415 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 |||||| | || |||||||| || || |||||| ||||||||||| | ||||||| Sbjct 414416 AAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTTATCAGCAGAGATGA 414475 Query 65208 GG 65209 || Sbjct 414476 GG 414477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595345342238240