Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq21577 149 6e-31
seq8150 132 5e-26
seq12251 129 6e-25
seq32410 127 2e-24
seq147642 104 2e-17
>seq21577
Length=2421781
Score = 149 bits (164), Expect = 6e-31
Identities = 156/200 (78%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
|||||| || ||||| || |||||||| || |||| | | | ||||| ||||||||||
Sbjct 24145 GGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCA-TCCTCCAGCTGCTTGC 24203
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
| ||| | || || ||||||||||| ||||| |||||||||||||| ||| ||| ||
Sbjct 24204 CAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCT 24262
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | ||||| |||||| ||||||| || || | ||||| ||| ||||| |||||
Sbjct 24263 TTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGG 24322
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || || || ||||||||
Sbjct 24323 GTCTTCACAAAGATCTGCAT 24342
Score = 143 bits (158), Expect = 3e-29
Identities = 155/200 (78%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||| ||||| || ||||| || || ||| | | | || || ||||||||||
Sbjct 24829 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCA-TCTTCCAGCTGCTTGC 24887
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
| || | || || ||||||||||| ||||| |||||||||||||| ||| ||| ||
Sbjct 24888 CGGCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCT 24946
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||||
Sbjct 24947 TTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGG 25006
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| || ||||| ||||||||
Sbjct 25007 GTCTTGACGAAGATCTGCAT 25026
Score = 141 bits (156), Expect = 9e-29
Identities = 156/205 (76%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || |||| | | | || || ||||
Sbjct 23911 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCTTCCAGCT 23969
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || |||||||| || ||||| |||||||||||||| |||||
Sbjct 23970 GCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCT 24029
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| |||||| ||||||| || || | ||||| ||| ||||| |
Sbjct 24030 TGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 24089
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
||| || || || || ||||||||
Sbjct 24090 TCAAGGTCTTCACAAAGATCTGCAT 24114
Score = 141 bits (156), Expect = 9e-29
Identities = 158/206 (77%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || |||||||| || |||| | | | || || | ||
Sbjct 25051 ATGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCA-TCTTCCAACT 25109
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || |||||||| || |||||||||||||||||||| ||| |
Sbjct 25110 GCTTGCCAGCGAAGATCAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGAT-T 25168
Query 133576 TTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || || | | ||||| |||||| ||||||| || |||| ||||| ||| |||||
Sbjct 25169 TTAGCTTTCACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCA 25228
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || || ||||||||
Sbjct 25229 GTCAGCGTCTTCACAAAGATCTGCAT 25254
Score = 129 bits (142), Expect = 6e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| ||| || ||| | | | ||||| ||||
Sbjct 24367 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCCTCCAGCT 24425
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| ||| | || || ||||||||||| ||||| ||||||||||| || |||||
Sbjct 24426 GCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGGATCT 24485
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||||| ||||| ||||||| || || | |||| ||||| || |
Sbjct 24486 TGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATTGTTTTTCCAG 24545
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || || || ||||||||
Sbjct 24546 TTAGCGTCTTGACAAAGATCTGCAT 24570
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| ||| || ||| | | | || || | ||| |||||
Sbjct 24602 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCA-TCTTCCAACTGTTTGCC 24660
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || | ||||||||||| ||||| ||||||||||| || |||||| |||
Sbjct 24661 GGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTT 24720
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| | || ||||| || | |||| |||||| || |||| ||
Sbjct 24721 GACGTTCTCAATGGTGTCACTTGGTTCCACCTCAAGAGTGATGGTTTTACCAGTCAAGGT 24780
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 24781 CTTCACAAAGATCTGCAT 24798
>seq8150
Length=1005622
Score = 132 bits (146), Expect = 5e-26
Identities = 152/199 (76%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | || || |||||||||||
Sbjct 148780 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 148838
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581
||| | || || |||||||| || ||||| |||||||||||||| ||| ||| || |
Sbjct 148839 AGCGAAGATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTT 148897
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||||| |||||| ||||||| || || | ||||| ||| ||||| ||||| |
Sbjct 148898 TCACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGCG 148957
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 148958 TCTTCACAAAGATCTGCAT 148976
Score = 122 bits (134), Expect = 8e-23
Identities = 139/184 (76%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| || | ||| | | | || || ||||
Sbjct 148501 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCA-TCTTCCAGCT 148559
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || ||||||||||| ||||| |||||||||||||| |||||
Sbjct 148560 GCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 148619
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| |||||| ||||||| || |||| || || ||| ||||| |
Sbjct 148620 TGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGGGATGGTCTTGCCAG 148679
Query 133636 TCAG 133639
||||
Sbjct 148680 TCAG 148683
>seq12251
Length=2530766
Score = 129 bits (142), Expect = 6e-25
Identities = 153/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| || || ||| ||| | || || ||||
Sbjct 1821548 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGACCA-TCTTCCAGCT 1821490
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || |||| | || ||||||||| || || |||||||| ||||| ||| |
Sbjct 1821489 GTTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATTT 1821430
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||||| | ||||| |||||| | ||||| || || | ||||| || ||||| |
Sbjct 1821429 TTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCGACCTCAAGGGTGATCGTCTTGCCAG 1821370
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| || || ||||||||
Sbjct 1821369 TGAGGGTTTTGACAAAGATCTGCAT 1821345
>seq32410
Length=743546
Score = 127 bits (140), Expect = 2e-24
Identities = 155/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| || || ||| | | | || || ||||
Sbjct 172255 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGTGTGCGGCCA-TCTTCCAGCT 172197
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | || | || ||||||||| || || |||||||| ||||| || ||
Sbjct 172196 GTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGACCT 172137
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||||| | ||||| |||||| | ||||| || || | ||||| ||| ||||| |
Sbjct 172136 TTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGCCTG 172077
Query 133636 TCAGAGTTTTTACGAAAATCTGCATGGCT 133664
||| || || ||||| ||||||||| ||
Sbjct 172076 TCAAGGTCTTGACGAAGATCTGCATGCCT 172048
Score = 127 bits (140), Expect = 2e-24
Identities = 155/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| || || ||| | | | || || ||||
Sbjct 172483 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCA-TCTTCCAGCT 172425
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | || | || ||||||||| || || |||||||| ||||| |||||
Sbjct 172424 GTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCT 172365
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| |||||| | ||||| || || | ||||| ||| ||||| |
Sbjct 172364 TAGCCTTGACGTTCTCAATTGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTGCCTG 172305
Query 133636 TCAGAGTTTTTACGAAAATCTGCATGGCT 133664
||| || || ||||| ||||||||| ||
Sbjct 172304 TCAAGGTCTTGACGAAGATCTGCATGCCT 172276
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||||||||| || ||||| || || ||| | | | || || ||||
Sbjct 172027 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAATGTGCGGCCA-TCTTCCAGCT 171969
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| ||||| || | || | || ||||||||| || || |||||||| ||||| || ||
Sbjct 171968 GTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGACCT 171909
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
|| ||||| | ||||| |||||| | ||||| || || | ||||| ||| || || |
Sbjct 171908 TTGCCTTGACGTTCTCAATGGTGTCGCTTGGCTCAACCTCAAGGGTGATGGTCTTACCAG 171849
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| || || ||||||||
Sbjct 171848 TGAGTGTTTTGACAAAGATCTGCAT 171824
>seq147642
Length=763
Score = 104 bits (114), Expect = 2e-17
Identities = 90/112 (80%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923
|||||||||| ||||| | ||||| || ||||||||||| ||||| ||||| || |
Sbjct 630 TGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCCCAGGTTCTGCTGGT 689
Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||||||| |||||| || |||||||| |||||||| ||| ||| || ||
Sbjct 690 TGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCGGTCTC 741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482428741962520
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