Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq12251 82.4 6e-11 >seq12251 Length=2530766 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 106252 GTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAG 106311 ||||| | ||||| || ||||| ||||| | ||||||||||| || ||| | || | Sbjct 1821337 GTTTATAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACGATCACCCTTGAGGTCG 1821396 Query 106312 AACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCG 106371 | || |||| | ||| | || || |||||| |||||||||||| | ||| Sbjct 1821397 AGCCAAGCGACACCATTGAGAACGTCAAGGCAAAAATCCAGGACAAAGAAGGCATTCCCC 1821456 Query 106372 TTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCG 106431 ||| || || ||| | |||| ||| |||||||| | |||||| | || || | Sbjct 1821457 CTGACCAGCAGAGGTTGATTTTTGCTGGCAAACAGCTGGAAGATGGTCGCACACTGTCTG 1821516 Query 106432 ATTACAACATACAAAAAGAATCTAC 106456 | |||||||| || ||||| || || Sbjct 1821517 ACTACAACATCCAGAAAGAGTCCAC 1821541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401524595425184