Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq21577 122 8e-23
seq8150 116 3e-21
seq35953 87.8 2e-12
>seq21577
Length=2421781
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || || || | || ||||||||||| || || ||
Sbjct 23923 CTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 23982
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | ||||| || ||||||||| |||||| ||||| |
Sbjct 23983 GATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 24042
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 24043 CTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 24102
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 24103 AAAGATCTGCAT 24114
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| |||| || || || | || |||| ||| || || || ||
Sbjct 24607 CTCTTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATCTTCCAACTGTTTGCCGGCGAA 24666
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||| | ||||| || ||||| || |||||| ||| | |
Sbjct 24667 GATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTT 24726
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | ||||||||| | ||||| |||||||| ||||| || |||||
Sbjct 24727 CTCAATGGTGTCACTTGGTTCCACCTCAAGAGTGATGGTTTTACCAGTCAAGGTCTTCAC 24786
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 24787 AAAGATCTGCAT 24798
Score = 109 bits (120), Expect = 5e-19
Identities = 141/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||||||||| | || || || | || ||||||||||| || || ||
Sbjct 24152 TCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAG 24211
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| ||||||||||| | ||||| || |||||||| ||| ||| |||| |||
Sbjct 24212 ATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGTT 24270
Query 35666 -GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| || |||||
Sbjct 24271 CTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 24330
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 24331 AAAGATCTGCAT 24342
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || || ||
Sbjct 24379 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 24438
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||| || |||||| ||||| |
Sbjct 24439 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTCACGTT 24498
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || || |||| ||||| ||||| || || | || || ||
Sbjct 24499 CTCAATGGTGTCACTGGGCTCAACTTCCAAAGTGATTGTTTTTCCAGTTAGCGTCTTGAC 24558
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 24559 AAAGATCTGCAT 24570
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || || || | || ||||||||||| || |||||
Sbjct 24835 CTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCTTCCAGCTGCTTGCCGGCAAA 24894
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || |||||||| ||| ||| |||| ||
Sbjct 24895 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACGT 24953
Query 35665 T-GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | |||||||| | || ||||| | ||||| || || || |||| || || |
Sbjct 24954 TCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTGA 25013
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 25014 CGAAGATCTGCAT 25026
Score = 100 bits (110), Expect = 3e-16
Identities = 139/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||||||||| | || || || | || |||| |||||| || || ||
Sbjct 25064 TCCTTCTGGATGTTGTAATCAGACAGCGTGCGTCCATCTTCCAACTGCTTGCCAGCGAAG 25123
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
|||| |||||||| || | ||| | || |||||||| ||| ||| || |||| | |
Sbjct 25124 ATCAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGAT-TTTAGCTTTCACATT 25182
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| || |||||
Sbjct 25183 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTCAC 25242
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 25243 AAAGATCTGCAT 25254
>seq8150
Length=1005622
Score = 116 bits (128), Expect = 3e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || || ||
Sbjct 148785 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAA 148844
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663
|||| |||||||| || | ||||| || |||||||| ||| ||| || |||| |
Sbjct 148845 GATCAGACGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGGAT-TTTAGCTTTCACAT 148903
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
| | | |||||||| | || ||||| | ||||| || || || |||| || ||||
Sbjct 148904 TCTCAATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGCGTCTTCA 148963
Query 35724 CAAATATCTGCAT 35736
|||| ||||||||
Sbjct 148964 CAAAGATCTGCAT 148976
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | ||| || | || |||||||||||||| || ||
Sbjct 148513 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTGCTTACCAGCGAA 148572
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||||||| |||||| ||| | |
Sbjct 148573 GATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 148632
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714
| | |||||||| | || ||||| | | ||| || || || ||||
Sbjct 148633 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGGGATGGTCTTGCCAGTCA 148682
>seq35953
Length=415359
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 35635 CTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCAC 35694
|||||||||| |||||| ||||| | | | | |||||||| | || ||||| |
Sbjct 1388 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAG 1447
Query 35695 CGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
||||| |||||||| ||||||||||||||||| ||||||||| ||
Sbjct 1448 GGTGATGGTTTTACCGGTCAAAGTTTTCACAAAGATCTGCATTTTG 1493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449868498278840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |