Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq36662 95.1 2e-14 >seq36662 Length=417660 Score = 95.1 bits (104), Expect = 2e-14 Identities = 196/290 (68%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 13692 GAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGAGATGTTCGAGCGCCTC 13751 || || ||||| || ||||| || ||||| || | |||||||||||||| || | ||| Sbjct 409232 GATTTCCCCATTGCTTACTCCATGGTGATACATGAGAAGATCGAGATGTTTGAAAGGCTC 409173 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAG--TCCG 13809 ||||| ||||| ||| | || || || | ||||| || ||||||||| ||| |||| Sbjct 409172 CTGAGAGCCATTTACACTCCTCACAATGTGTACTGTGTTCACGTGGACCAGAAGTCTCCG 409113 Query 13810 GCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGG 13869 | || || | | || |||||| | ||| | | || ||| ||| Sbjct 409112 GAGA--TCTTTAAAGAAGCAGTAAGGGCCATTACGTCCTGCCTGACCAATGTGTTTGTGG 409055 Query 13870 CCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCT 13929 || | ||| | | ||| | |||| ||| ||| ||| || || || ||| |||||| Sbjct 409054 CCAGCAAACTGGAGCATGTGATCTACGCCTCTTGGTCTCGAGTTCAAGCGGACATCAGCT 408995 Query 13930 GCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAAC 13979 ||||| ||| ||| | || || ||| |||||| ||| ||||||||| Sbjct 408994 GCATGCAGGATCTGCTCAAGTCACCTGTCCAGTGGAAGTATCTGCTCAAC 408945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657387360116480