Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq32410 98.7 6e-16 >seq32410 Length=743546 Score = 98.7 bits (108), Expect = 6e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || ||||||||||||| ||| | ||| ||| || || ||||| || || || Sbjct 172506 CCTCCCCTGAGACGCAACACCAGATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 172447 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| || | ||||| || ||||| |||||||| || || | ||| ||||| || || Sbjct 172446 AATGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGA 172387 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCC 34656 | || || ||||| |||| || | || ||| | |||||||| ||| | ||| Sbjct 172386 ATGCCTTCTTTGTCCTGGATC-TTAGCCTTGACGTTCTCAATTGTGTCGCTTGG--CTCA 172330 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| || || || || || || || || || || ||||||||| Sbjct 172329 ACCTCAAGGGTGATGGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATG 172279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314099870624309