Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq20878 104 2e-17
seq41124 96.9 3e-15
>seq20878
Length=969699
Score = 104 bits (114), Expect = 2e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 3250 TGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGG 3309
||| ||||||||| ||| || || ||||||||||| || || |||||||||||||||||
Sbjct 551313 TGAAGAGCTCTTCAAAGACGGAGTGAACTGGGGGCGGATCGTCGCTTTCTTTGAGTTTGG 551372
Query 3310 TGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGC 3369
||| ||||||||||| ||| |||| | | || | |||| || || || |||||
Sbjct 551373 TGGGACCATGTGTGTGGAGAGCTTCAACCGGGAGATGGCGTCCCAGGTAGATAATATTGC 551432
Query 3370 CGCGTGGATGACAGACCAGCTG 3391
|||||||||||| | |||
Sbjct 551433 ACACTGGATGACAGACTACCTG 551454
>seq41124
Length=1142746
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 3251 GATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGT 3310
|| |||||||| ||| || || ||||||||||| || | ||||||||||||||||||
Sbjct 693501 GAAGAGCTCTTTAAAGACGGAGTGAACTGGGGGCGGATCATCGCTTTCTTTGAGTTTGGT 693442
Query 3311 GGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCC 3370
|| ||||||||||| |||||||| | | || | |||| || || || |||||
Sbjct 693441 GGGACCATGTGTGTGGAGAGCGTCAACCGGGAGATGGCGTCCCAGGTAGATAATATTGCA 693382
Query 3371 GCGTGGATGACAGACCAGCTG 3391
|||||||||||| | |||
Sbjct 693381 CACTGGATGACAGACTACCTG 693361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413647490597572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |