Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq36865 102 7e-17
seq34520 82.4 7e-11
>seq36865
Length=2971667
Score = 102 bits (112), Expect = 7e-17
Identities = 103/133 (77%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 4567 AACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626
||||| | |||||||| || ||||| || || | || | ||||||||| | ||||| |
Sbjct 1669567 AACCT-CATCTCTGCTGATGAGTTCATTGGAGTAGGTGAGTCCGGGCATCAGGCCTCTTT 1669509
Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686
| || | ||| | || || |||||||| ||||| ||||| |||||||| || || ||||
Sbjct 1669508 TCTTCAACCAGTAGATGGCAGCAAATGATCCAGAGAAGAAGATGCCTTCCACTGCTGCAA 1669449
Query 4687 ACGCTACTAATCG 4699
| |||||||||||
Sbjct 1669448 ATGCTACTAATCG 1669436
>seq34520
Length=2775569
Score = 82.4 bits (90), Expect = 7e-11
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868
|| |||| || || ||||| || | || || ||||||||||| || || ||||| ||
Sbjct 504778 GGATCTTTGATGTAGGTGTCAATCAACAGACTGTACATTTCAGAGTGGATGTTTTCCATG 504719
Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926
|||||||| || ||||| ||||| | ||||| || ||||| ||||| | | |||||
Sbjct 504718 GCAATCTGGAAACCGTAGAAGCAGCGGGCTTCAGTCACTTGGACTTCCTGAGTAAATC 504661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426195134204609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |