Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq38558 161 1e-34
seq43433 152 7e-32
seq33531 120 4e-22
seq160517 118 2e-21
seq32347 118 2e-21
seq35465 113 6e-20
seq41984 111 2e-19
>seq38558
Length=2776019
Score = 161 bits (178), Expect = 1e-34
Identities = 176/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| ||| | || ||||| | || || |||||||| || ||||||||| | |||||
Sbjct 2249706 TTGACAATCTCAAAGCCCACTTTGCCACCAAAGGTGCTCGGTTTCCAGTACTCAGGGGAA 2249765
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| || |||| || |||||||||||| | || || |||| || | ||| ||
Sbjct 2249766 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 2249825
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||||||||| | |||||| || |||| || || || || |||||||||
Sbjct 2249826 TCCCCAAAGATGGCGTTGGTCCTGGGCTTCTCAACCAGCAAGCCAGTATAAAGCTCCACA 2249885
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| || || | |||||| | | ||||| ||||| |||||||||||||||
Sbjct 2249886 GCATCCACATGTCCGTACAACTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 2249939
Score = 122 bits (134), Expect = 1e-22
Identities = 174/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || |||| |||||| || |||||||| ||||| ||||||| ||| || |||||
Sbjct 2250840 TCACCAATAAGGATGAGCCGTGTGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 2250899
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| | || || | || ||||| | ||||||||| | |||||||| || || ||||||
Sbjct 2250900 TCCTTCTTTAGTATTTCACACACTCGGTTGTGTTCACGCAGCCAGATGGTAGCATACATC 2250959
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
||||| || || ||||| ||||| ||||| ||||| || || | || || ||
Sbjct 2250960 ATGAGTCCTGGAACCAGTCCAAAGGCCTCGTGACCCACGGCAAAGCGACGAGACTCAGGT 2251019
Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 2251020 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 2251079
Query 9472 CCGTC 9476
|| ||
Sbjct 2251080 CCATC 2251084
Score = 95.1 bits (104), Expect = 2e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||| ||| || | || ||||| |||||||| || || ||||| || | | | |
Sbjct 2251993 TCACCTGCGACTCCCATTGGTGTTGGGCAATCGTGTGGGACAGGAGGCAGTGTGCGAGTG 2252052
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| |||
Sbjct 2252053 TAGTAGGAGAGATTAGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATAAA 2252112
Query 10028 GGAGGGCTGTCAATCAAATCGG 10049
|| ||||| ||||||| || ||
Sbjct 2252113 GGTGGGCTATCAATCAGATGGG 2252134
>seq43433
Length=1517348
Score = 152 bits (168), Expect = 7e-32
Identities = 174/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410
||||| ||| | || ||||| | || || |||||||| || ||||||||| | |||||
Sbjct 1336111 TTGACAATCTCAAAGCCCACTTTGCCACCAAAGGTGCTTGGTTTCCAGTACTCGGGGGAA 1336052
Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470
|||||| || |||| || |||||||||||| | || || |||| || | ||| ||
Sbjct 1336051 CAGATGGGATTTCCCATAAGTCCTTTGAGGGAGTAGGGGGCACCCATTTCCACCATGGTC 1335992
Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530
|| || ||||||||||||| | |||||| || |||| | || | || |||||||||
Sbjct 1335991 TCCCCAAAGATGGCGTTGGTCCTGGGCTTCTCAACCAGCAGCCCAGCATAAAGCTCCACA 1335932
Query 8531 GCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCT 8584
|| || || || ||||| | | ||||| ||||| |||||||||||||||
Sbjct 1335931 GCATCCACATCCCCGTACATCTCTTCAAGTTCAGCAGCCATCTCCTTTTCTCCT 1335878
Score = 131 bits (144), Expect = 2e-25
Identities = 176/245 (72%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291
|| || |||| |||||| || | |||||| ||||| ||||||| ||| || |||||
Sbjct 1334972 TCACCAATAAGGATGAGCCGTGCGGTCTGAAACAGCCTCTCGTCATCCCAGTCAGGATGC 1334913
Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351
|| || || || | ||| ||||| | ||||||||| | |||||||| ||||| ||||||
Sbjct 1334912 TCCTGCTTTAGTATATCACACACTCGGTTGTGTTCACGCAGCCAGATGGTGGCATACATC 1334853
Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGC 9411
||||| || || ||||| ||||| || || ||||| || || | || | || ||
Sbjct 1334852 ATGAGTCCGGGAACCAGTCCAAAGGCTTCGTGACCAACGGCAAAGCGACGGGACTCAGGT 1334793
Query 9412 ACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCA 9471
|| | ||||| ||| ||||| || || || || |||| | || ||||| | |||
Sbjct 1334792 ACATGAGGAGGGTAGTGCATGTCTACTTGAACCTCACTGACTGTCGGAGGATAAACCTCA 1334733
Query 9472 CCGTC 9476
|| ||
Sbjct 1334732 CCATC 1334728
Score = 104 bits (114), Expect = 3e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||| ||| || | || ||||| |||||||| || || ||||| || | | | |
Sbjct 1333808 TCACCTGCGACTCCCATTGGTGTTGGGCAATCGTGCGGGACAGGAGGCAGCGTGCGAGTG 1333749
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|| ||||||||||| ||| | |||||||||||| ||| | ||||| || ||| ||||
Sbjct 1333748 TAGTAGGAGAGATTTGAGTAGGCTTCCCAGCTTTTGTAACCATAGTCAGCATTGAATATA 1333689
Query 10028 GGAGGGCTGTCAATCAAATCGG 10049
|||||||| ||||||| || ||
Sbjct 1333688 GGAGGGCTATCAATCAGATGGG 1333667
>seq33531
Length=3659319
Score = 120 bits (132), Expect = 4e-22
Identities = 172/240 (72%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| ||||| ||||| | |||||||| ||||| ||||| || | ||| |||||||||
Sbjct 13640 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTAGGATGTTCT 13581
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
|||||||| | ||| ||||| | |||||| || | ||||| | ||||||||||| ||
Sbjct 13580 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACATACTG 13521
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCG-GGCAC 9413
|| || || | ||||||||| | ||||| || | ||||| || || | | || ||
Sbjct 13520 AGACCCGGCAGCAGGCCAAACACTTCTTGCCCAATGGCCAGCTGC-TGCTCCGGTGGGAC 13462
Query 9414 TTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473
|| || ||| |||| | ||| | | ||| || | |||||||||||| |||||
Sbjct 13461 AGACGGCGGGTAGCTCATTTTGACCGGTGCATCTAGCACTGTGGGGGGATACATCTCACC 13402
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| || || || ||||||||||||||| | |||||||| || || |||||||||||
Sbjct 18206 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAATAGGATTTCCCATGAGGCCT 18147
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
|| ||||| || || ||||||| || | ||||| ||||| || || || | ||
Sbjct 18146 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCACCAAATATCGCACCAGATCGT 18087
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
| || || | ||| | | | ||| | ||||| ||| || | || || || || ||
Sbjct 18086 GTATTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATCACCATACAGTTCC 18027
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
||||| ||| ||||| | |||||||||
Sbjct 18026 TCTAGTTCTTTAGCCATCTCTTCTTCTCCTGT 17995
>seq160517
Length=1345
Score = 118 bits (130), Expect = 2e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||||| | || || || ||||| ||| ||||||| | || || || || | ||
Sbjct 427 AATCCCACTTTCCCACCAAATGTGCTCGGCATCCAGTATTCAGGAGAACAAATAGCATTT 486
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||||||||||||||| ||| | || || |||| ||| | || |||| || || |
Sbjct 487 CCCATGAGGCCTTTGAGAGAGTAGGGGGCTCCCATCTCTACCATAGTCTCCCCAAACACA 546
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAA-TCCGGTGTACAGCTCCACAGCCTCGACGTC 8541
|||||||| | ||| || |||| |||||| || | |||||||| || || || | ||
Sbjct 547 GCGTTGGGTCTGGGTTTCTCCA-CAAGAAGGCCAGGATACAGCTCAACCGCGTCTATGTG 605
Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590
||||| || | | | |||||| || | |||||| ||||||||||||
Sbjct 606 ACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 654
>seq32347
Length=2478086
Score = 118 bits (130), Expect = 2e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||||| | || || || ||||| ||| ||||||| | || || || || | ||
Sbjct 1845211 AATCCCACTTTCCCACCAAATGTGCTCGGCATCCAGTATTCAGGAGAACAAATAGCATTT 1845152
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||||||||||||||| ||| | || || |||| ||| | || |||| || || |
Sbjct 1845151 CCCATGAGGCCTTTGAGAGAGTAGGGGGCTCCCATCTCTACCATAGTCTCCCCAAACACA 1845092
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541
|||||||| | ||| || ||||| ||||| || | |||||||| || || || | ||
Sbjct 1845091 GCGTTGGGTCTGGGTTTCTCCAC-AAGAAGGCCAGGATACAGCTCAACCGCGTCTATGTG 1845033
Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590
||||| || | | | |||||| || | |||||| ||||||||||||
Sbjct 1845032 ACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 1844984
>seq35465
Length=3269434
Score = 113 bits (124), Expect = 6e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422
|| ||||| | || || || ||||| ||| ||||||| | || | || || | ||
Sbjct 2903268 AATCCCACTTTCCCACCAAATGTGCTAGGCATCCAGTATTCAGGAGCACAAATAGCATTT 2903209
Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482
|||||||||||||||| ||| | || || |||| ||| | || |||| || || |
Sbjct 2903208 CCCATGAGGCCTTTGAGAGAGTAGGGCGCTCCCATCTCCACCATAGTCTCCCCAAACACA 2903149
Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAAT-CCGGTGTACAGCTCCACAGCCTCGACGTC 8541
| |||| | ||||| || ||||| ||||| || || |||||||| || || || | ||
Sbjct 2903148 GAGTTGAGCCGGGGTTTCTCCAC-AAGAAGGCCAGTATACAGCTCAACCGCATCTATGTG 2903090
Query 8542 TCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGTTTTA 8590
||||| || | | | |||||| || | |||||| ||||||||||||
Sbjct 2903089 ACCGTACAGCTGCTTCATTTCGGCTGCCAGCTCCTTGTCTCCTGTTTTA 2903041
>seq41984
Length=1574288
Score = 111 bits (122), Expect = 2e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 9235 CCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCT 9294
|| ||||| ||||| | |||||||| ||||| ||||| || | ||| ||||||||||
Sbjct 1305159 CCTATAATAATGAGCCTGGTGGTCTGAAACAGCTGCTCATCCCCCCAGGTTGGATGTTCT 1305100
Query 9295 TGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATG 9354
|||||||| | ||| ||||| | |||||| || | ||||| | |||||||||| ||
Sbjct 1305099 TGTTTCAGGATATCACACACACGGTTGTGCTCACGCAGCCACAAGGTGGCGTACAAACTG 1305040
Query 9355 AGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACT 9414
|| || || | ||| ||||| | ||||| || | ||||| ||| | | || ||
Sbjct 1305039 AGACCCGGCAGCAGTCCAAACACTTCTTGCCCAATGGCCAGCTGCAGCTCTGGCGGGACA 1304980
Query 9415 TCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACC 9473
|| || ||| |||| | ||| | | ||| || | |||||| || || |||||
Sbjct 1304979 GACGGTGGGTAGTTCATTTTGACCGGTGCATCTAGCACTGTGGGGGGGTATATCTCACC 1304921
Score = 89.7 bits (98), Expect = 7e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| || || || ||||||||||||||| | |||||||| || || |||||||||||
Sbjct 1320259 CCCCCAAATGTACTGGGCTTCCAGTACTCAGGGGAGCAAATAGGATTTCCCATGAGGCCT 1320200
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
|| ||||| || || ||||||| || | ||||| || || || || || || ||
Sbjct 1320199 TTTAGGGAAAATGGGGCCCCCATTTCCACCATGCTTTCGCCAAATATCGCACCAGGTCGT 1320140
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCC 8554
| ||| || | ||| | | | ||| | ||||| ||| || | | || || || |
Sbjct 1320139 GTCTTCTCTAGCAAAAGAGCTGGGTAGAACTCCAGAGCATCAATATGACCATACAGTTTC 1320080
Query 8555 CTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586
||||| ||| ||||| |||||||||||
Sbjct 1320079 TCTAGTTCTTTAGCCATCTCTTTTTCTCCTGT 1320048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715405652313920
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